BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039473
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14
ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1, chloropl...    80   1e-13
ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
emb|CBI28050.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    79   4e-13

>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/59 (62%), Positives = 42/59 (71%), Gaps = 10/59 (16%)
 Frame = -2

Query: 223 LLEKWNKADALYATPT*SNDDW----------CFLVANDEMSDHIFQLFGNGFFPRWKK 77
           L++KWN ADALYATPT SNDDW          C LV NDEM DH+FQL GN FFP+WK+
Sbjct: 517 LIDKWNNADALYATPTGSNDDWYWLYAAIKFRCLLVTNDEMRDHLFQLLGNDFFPKWKE 575


>ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449506617|ref|XP_004162799.1| PREDICTED:
           proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 633

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/59 (62%), Positives = 40/59 (67%), Gaps = 10/59 (16%)
 Frame = -2

Query: 223 LLEKWNKADALYATPT*SNDDW----------CFLVANDEMSDHIFQLFGNGFFPRWKK 77
           L+EKW  ADALYATPT SNDDW          C +V NDEM DH FQL GN FFPRWK+
Sbjct: 502 LIEKWKNADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHTFQLLGNDFFPRWKE 560


>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 10/59 (16%)
 Frame = -2

Query: 223 LLEKWNKADALYATPT*SNDDW----------CFLVANDEMSDHIFQLFGNGFFPRWKK 77
           L+EKW  ADALY TPT SNDDW          C +V NDEM DHIFQL GN FFP+WK+
Sbjct: 609 LIEKWKNADALYTTPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHIFQLLGNDFFPKWKE 667


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 10/59 (16%)
 Frame = -2

Query: 223 LLEKWNKADALYATPT*SNDDW----------CFLVANDEMSDHIFQLFGNGFFPRWKK 77
           L+EKW  ADALY TPT SNDDW          C +V NDEM DHIFQL GN FFP+WK+
Sbjct: 544 LIEKWKNADALYTTPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHIFQLLGNDFFPKWKE 602


>ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32230, mitochondrial-like [Glycine max]
          Length = 540

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 10/59 (16%)
 Frame = -2

Query: 223 LLEKWNKADALYATPT*SNDDW----------CFLVANDEMSDHIFQLFGNGFFPRWKK 77
           L++KWN ADALYATP+ SND+W          C LV NDEM DH+FQL GN FFP+WK+
Sbjct: 388 LIDKWNNADALYATPSGSNDNWYWLYAAIKFRCLLVTNDEMRDHLFQLLGNDFFPKWKE 446