BLASTX nr result

ID: Coptis24_contig00039449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039449
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47905.1| unknown [Medicago truncatula]                          180   9e-44
ref|XP_002317524.1| predicted protein [Populus trichocarpa] gi|2...   178   4e-43
ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246...   178   5e-43
ref|XP_002533713.1| structural constituent of cell wall, putativ...   177   8e-43
ref|XP_002267118.2| PREDICTED: uncharacterized protein LOC100241...   177   1e-42

>gb|AFK47905.1| unknown [Medicago truncatula]
          Length = 341

 Score =  180 bits (457), Expect = 9e-44
 Identities = 83/117 (70%), Positives = 94/117 (80%)
 Frame = +3

Query: 3   CFDPRFVGGDGIVFYFHGRSNQHFSLISDPNLQINARFIGHRPNGRTRDYTWIQALGVMF 182
           C DPRFVG DGIVFYFHGR N+HFSL+SD NLQINARFIG RP GR RDYTWIQALGV+F
Sbjct: 92  CLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALGVLF 151

Query: 183 DFHTFSVEAKKVEKWNDEVDQLQFTYDGKALEITEDHLSTWQSPKQEIKVERTSNMN 353
           D H FS+EA     W+DEVD L+ +YDGK L I E HLSTWQS + +++VERTSN N
Sbjct: 152 DSHNFSIEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQSEENQLRVERTSNEN 208


>ref|XP_002317524.1| predicted protein [Populus trichocarpa] gi|222860589|gb|EEE98136.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  178 bits (452), Expect = 4e-43
 Identities = 80/118 (67%), Positives = 99/118 (83%)
 Frame = +3

Query: 3   CFDPRFVGGDGIVFYFHGRSNQHFSLISDPNLQINARFIGHRPNGRTRDYTWIQALGVMF 182
           C DPRF+GGDGIVFYFHG+SN+HFSL+SD NLQINARFIG RP GRTRD+TWIQALG++F
Sbjct: 53  CLDPRFIGGDGIVFYFHGKSNEHFSLVSDLNLQINARFIGLRPAGRTRDFTWIQALGILF 112

Query: 183 DFHTFSVEAKKVEKWNDEVDQLQFTYDGKALEITEDHLSTWQSPKQEIKVERTSNMNN 356
           D H+FS+EA +   WN EVD L+F+++G+ L I E  LSTWQSP  +IKV+RTS+ N+
Sbjct: 113 DSHSFSLEATEASTWNGEVDHLKFSHNGEDLIIPEGQLSTWQSPDSDIKVQRTSSKNS 170


>ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246927 [Vitis vinifera]
           gi|302143064|emb|CBI20359.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  178 bits (451), Expect = 5e-43
 Identities = 78/118 (66%), Positives = 96/118 (81%)
 Frame = +3

Query: 3   CFDPRFVGGDGIVFYFHGRSNQHFSLISDPNLQINARFIGHRPNGRTRDYTWIQALGVMF 182
           C DPRF+GGDGIVFYFHG+ N+HFSL+SD NLQINA FIG RP GRTRDYTWIQALG++ 
Sbjct: 88  CLDPRFIGGDGIVFYFHGKRNEHFSLVSDLNLQINAHFIGLRPAGRTRDYTWIQALGILV 147

Query: 183 DFHTFSVEAKKVEKWNDEVDQLQFTYDGKALEITEDHLSTWQSPKQEIKVERTSNMNN 356
           D H+FS+EA +   W+DE+D L+F+YDGK L+I E HLS W   + ++KVERTSN N+
Sbjct: 148 DSHSFSLEATRAVAWDDEIDHLKFSYDGKELDIPEGHLSAWNFSENDLKVERTSNRNS 205


>ref|XP_002533713.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223526387|gb|EEF28676.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 340

 Score =  177 bits (449), Expect = 8e-43
 Identities = 76/118 (64%), Positives = 98/118 (83%)
 Frame = +3

Query: 3   CFDPRFVGGDGIVFYFHGRSNQHFSLISDPNLQINARFIGHRPNGRTRDYTWIQALGVMF 182
           C+DPRF+GGDG+VFYFHG+SN+HFSL+SD NLQIN RFIGHRP GRTRD+TWIQALGV+F
Sbjct: 90  CYDPRFIGGDGVVFYFHGKSNEHFSLVSDTNLQINGRFIGHRPAGRTRDFTWIQALGVLF 149

Query: 183 DFHTFSVEAKKVEKWNDEVDQLQFTYDGKALEITEDHLSTWQSPKQEIKVERTSNMNN 356
           +  TFS+EA K   W+ E+D L+FTY+G+ L + E  LS W SP++++KVER S+ N+
Sbjct: 150 NTRTFSLEATKAATWDSEIDHLKFTYNGQDLVVPEGSLSIWYSPEKDVKVERVSSRNS 207


>ref|XP_002267118.2| PREDICTED: uncharacterized protein LOC100241834 [Vitis vinifera]
          Length = 348

 Score =  177 bits (448), Expect = 1e-42
 Identities = 79/118 (66%), Positives = 97/118 (82%)
 Frame = +3

Query: 3   CFDPRFVGGDGIVFYFHGRSNQHFSLISDPNLQINARFIGHRPNGRTRDYTWIQALGVMF 182
           CFDPRF+GGDGIVFYFHG+ N+HFSL+SD NLQIN+RFIG RP GRTRDYTWIQALG+MF
Sbjct: 98  CFDPRFIGGDGIVFYFHGKGNEHFSLVSDINLQINSRFIGLRPAGRTRDYTWIQALGLMF 157

Query: 183 DFHTFSVEAKKVEKWNDEVDQLQFTYDGKALEITEDHLSTWQSPKQEIKVERTSNMNN 356
             HTF++EA + EKW++E D LQF+YDG+AL I E   S W SP+  +KVER ++ N+
Sbjct: 158 GSHTFTLEATRTEKWDNEEDHLQFSYDGEALSIPEGLYSEWTSPENNLKVERIASKNS 215


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