BLASTX nr result

ID: Coptis24_contig00039448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039448
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517964.1| Indole-3-acetic acid-amido synthetase GH3.5,...   115   3e-24
ref|XP_002272560.1| PREDICTED: probable indole-3-acetic acid-ami...   113   1e-23
ref|XP_002329408.1| GH3 family protein [Populus trichocarpa] gi|...   110   9e-23
ref|XP_002319368.1| GH3 family protein [Populus trichocarpa] gi|...   110   1e-22
gb|ABK95621.1| unknown [Populus trichocarpa]                          110   1e-22

>ref|XP_002517964.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus
           communis] gi|223542946|gb|EEF44482.1| Indole-3-acetic
           acid-amido synthetase GH3.5, putative [Ricinus communis]
          Length = 600

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/83 (63%), Positives = 68/83 (81%)
 Frame = -1

Query: 250 NNINHEDSEIIRWFDEISENSGFVQTETLRHIIELNSGSEYLRKWFGGISVQDLDSSSVE 71
           NN +    +IIRWFD++SEN+G VQT TLR I+ELN G EYL+KW G I +Q++D+ ++E
Sbjct: 14  NNGHCSSYDIIRWFDDVSENAGKVQTGTLRRILELNCGVEYLKKWLGDIKIQEMDACALE 73

Query: 70  SLYTSLVPLASHADLEPYIMRVA 2
           SLYTSLVPLASHADL+PYI R+A
Sbjct: 74  SLYTSLVPLASHADLDPYIQRIA 96


>ref|XP_002272560.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5
           [Vitis vinifera] gi|297739258|emb|CBI28909.3| unnamed
           protein product [Vitis vinifera]
          Length = 592

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/77 (66%), Positives = 68/77 (88%)
 Frame = -1

Query: 232 DSEIIRWFDEISENSGFVQTETLRHIIELNSGSEYLRKWFGGISVQDLDSSSVESLYTSL 53
           + EII WF+++SEN+G+VQT+TL  I+ELNSG EYL+KW G I+VQ++++S++ESLYTSL
Sbjct: 12  EHEIIGWFEDVSENTGYVQTQTLCRILELNSGVEYLKKWLGDINVQEMEASALESLYTSL 71

Query: 52  VPLASHADLEPYIMRVA 2
           VPLASHADLE YI R+A
Sbjct: 72  VPLASHADLETYIQRIA 88


>ref|XP_002329408.1| GH3 family protein [Populus trichocarpa]
           gi|222870458|gb|EEF07589.1| GH3 family protein [Populus
           trichocarpa]
          Length = 595

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/83 (62%), Positives = 67/83 (80%)
 Frame = -1

Query: 250 NNINHEDSEIIRWFDEISENSGFVQTETLRHIIELNSGSEYLRKWFGGISVQDLDSSSVE 71
           N     + +II WF++ISE +G VQTETLR I++LN G EYL+KW G I V+D+D+S++E
Sbjct: 7   NGSRSYEHDIIGWFEDISEKAGQVQTETLRRILDLNWGVEYLKKWLGDIDVRDMDASALE 66

Query: 70  SLYTSLVPLASHADLEPYIMRVA 2
           SLYTSLVPLASHADLEP+I R+A
Sbjct: 67  SLYTSLVPLASHADLEPFINRIA 89


>ref|XP_002319368.1| GH3 family protein [Populus trichocarpa]
           gi|222857744|gb|EEE95291.1| GH3 family protein [Populus
           trichocarpa]
          Length = 595

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/77 (66%), Positives = 65/77 (84%)
 Frame = -1

Query: 232 DSEIIRWFDEISENSGFVQTETLRHIIELNSGSEYLRKWFGGISVQDLDSSSVESLYTSL 53
           + +II WF++IS+ +G VQTETLR I+ELN G EYL KW G I++QD+D+S++ESLYTSL
Sbjct: 14  EHDIISWFEDISKKAGQVQTETLRRILELNWGVEYLNKWLGDINIQDMDASALESLYTSL 73

Query: 52  VPLASHADLEPYIMRVA 2
           VP ASHADLEPYI R+A
Sbjct: 74  VPPASHADLEPYISRIA 90


>gb|ABK95621.1| unknown [Populus trichocarpa]
          Length = 595

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/77 (66%), Positives = 65/77 (84%)
 Frame = -1

Query: 232 DSEIIRWFDEISENSGFVQTETLRHIIELNSGSEYLRKWFGGISVQDLDSSSVESLYTSL 53
           + +II WF++IS+ +G VQTETLR I+ELN G EYL KW G I++QD+D+S++ESLYTSL
Sbjct: 14  EHDIISWFEDISKKAGQVQTETLRRILELNWGVEYLNKWLGDINIQDMDASALESLYTSL 73

Query: 52  VPLASHADLEPYIMRVA 2
           VP ASHADLEPYI R+A
Sbjct: 74  VPPASHADLEPYISRIA 90


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