BLASTX nr result

ID: Coptis24_contig00039429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039429
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281184.1| PREDICTED: pattern formation protein EMB30-l...    87   2e-21
emb|CAN79521.1| hypothetical protein VITISV_034627 [Vitis vinifera]    87   2e-21
emb|CBI28089.3| unnamed protein product [Vitis vinifera]               87   2e-21
ref|XP_002520491.1| peptidase, putative [Ricinus communis] gi|22...    85   6e-21
ref|XP_002324976.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-19

>ref|XP_002281184.1| PREDICTED: pattern formation protein EMB30-like [Vitis vinifera]
          Length = 1390

 Score = 87.4 bits (215), Expect(2) = 2e-21
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -3

Query: 269  LQCLRPLAESPGFRTF*LGVLRRMDTCMKAELRDNCELILHELVPELLREMITKMKEKGI 90
            LQ L+PL E+ GFRTF LGVLRRMDTCMKA+L    E  L EL+P+LLR+MIT MKEK I
Sbjct: 1297 LQFLKPLTENSGFRTFWLGVLRRMDTCMKADLGGYGETTLQELIPDLLRKMITIMKEKQI 1356

Query: 89   LAQRQDNDL 63
            L Q++  DL
Sbjct: 1357 LVQKEGEDL 1365



 Score = 40.0 bits (92), Expect(2) = 2e-21
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -2

Query: 60   DITYIQIQWIAPSLKEELF 4
            +ITYIQIQWIAPSLK+ELF
Sbjct: 1367 EITYIQIQWIAPSLKDELF 1385


>emb|CAN79521.1| hypothetical protein VITISV_034627 [Vitis vinifera]
          Length = 1366

 Score = 87.4 bits (215), Expect(2) = 2e-21
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -3

Query: 269  LQCLRPLAESPGFRTF*LGVLRRMDTCMKAELRDNCELILHELVPELLREMITKMKEKGI 90
            LQ L+PL E+ GFRTF LGVLRRMDTCMKA+L    E  L EL+P+LLR+MIT MKEK I
Sbjct: 1273 LQFLKPLTENXGFRTFWLGVLRRMDTCMKADLGGYGETTLQELIPDLLRKMITIMKEKQI 1332

Query: 89   LAQRQDNDL 63
            L Q++  DL
Sbjct: 1333 LVQKEGEDL 1341



 Score = 40.0 bits (92), Expect(2) = 2e-21
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -2

Query: 60   DITYIQIQWIAPSLKEELF 4
            +ITYIQIQWIAPSLK+ELF
Sbjct: 1343 EITYIQIQWIAPSLKDELF 1361


>emb|CBI28089.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score = 87.4 bits (215), Expect(2) = 2e-21
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -3

Query: 269  LQCLRPLAESPGFRTF*LGVLRRMDTCMKAELRDNCELILHELVPELLREMITKMKEKGI 90
            LQ L+PL E+ GFRTF LGVLRRMDTCMKA+L    E  L EL+P+LLR+MIT MKEK I
Sbjct: 1033 LQFLKPLTENSGFRTFWLGVLRRMDTCMKADLGGYGETTLQELIPDLLRKMITIMKEKQI 1092

Query: 89   LAQRQDNDL 63
            L Q++  DL
Sbjct: 1093 LVQKEGEDL 1101



 Score = 40.0 bits (92), Expect(2) = 2e-21
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -2

Query: 60   DITYIQIQWIAPSLKEELF 4
            +ITYIQIQWIAPSLK+ELF
Sbjct: 1103 EITYIQIQWIAPSLKDELF 1121


>ref|XP_002520491.1| peptidase, putative [Ricinus communis] gi|223540333|gb|EEF41904.1|
            peptidase, putative [Ricinus communis]
          Length = 2072

 Score = 85.1 bits (209), Expect(2) = 6e-21
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = -3

Query: 269  LQCLRPLAESPGFRTF*LGVLRRMDTCMKAELRDNCELILHELVPELLREMITKMKEKGI 90
            L+ L+P+  SPGFRTF LGVLRRMDTCMKA+L +  E  L E++P+LLR +ITKMKE+ I
Sbjct: 1979 LKFLKPITMSPGFRTFWLGVLRRMDTCMKADLGEYGETRLQEVIPDLLRRIITKMKEEEI 2038

Query: 89   LAQRQDNDL 63
            L   +D+DL
Sbjct: 2039 LVPTEDDDL 2047



 Score = 40.4 bits (93), Expect(2) = 6e-21
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 60   DITYIQIQWIAPSLKEELF 4
            DITYIQIQWIAP LKEELF
Sbjct: 2049 DITYIQIQWIAPFLKEELF 2067


>ref|XP_002324976.1| predicted protein [Populus trichocarpa] gi|222866410|gb|EEF03541.1|
            predicted protein [Populus trichocarpa]
          Length = 1375

 Score = 81.3 bits (199), Expect(2) = 2e-19
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = -3

Query: 260  LRPLAESPGFRTF*LGVLRRMDTCMKAELRDNCELILHELVPELLREMITKMKEKGILAQ 81
            L+ +A SPGFRTF LGVLRRMDTCMKA+L    E  L ++VP LLR MITKMKE+ IL Q
Sbjct: 1286 LKQIAASPGFRTFWLGVLRRMDTCMKADLGVWGETKLQQIVPSLLRRMITKMKEEEILVQ 1345

Query: 80   RQDNDL 63
            ++ +DL
Sbjct: 1346 KEGDDL 1351



 Score = 38.9 bits (89), Expect(2) = 2e-19
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 60   DITYIQIQWIAPSLKEELF 4
            DIT IQIQWIAPSLKEELF
Sbjct: 1353 DITDIQIQWIAPSLKEELF 1371


Top