BLASTX nr result

ID: Coptis24_contig00039414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039414
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274844.1| PREDICTED: uncharacterized protein LOC100265...    80   1e-13
ref|XP_002274757.2| PREDICTED: probable cysteine desulfurase-lik...    79   4e-13
ref|XP_003630258.1| Cysteine desulfurase [Medicago truncatula] g...    70   2e-10
ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002531673.1| cysteine desulfurylase, putative [Ricinus co...    66   3e-09

>ref|XP_002274844.1| PREDICTED: uncharacterized protein LOC100265977 [Vitis vinifera]
          Length = 658

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 6/79 (7%)
 Frame = -2

Query: 220 HLIETQDNLWIDRALQRLLPNPNINVLGNTSVKRQPVLSFLIYTTSLDEEKEIRDTSA-- 47
           ++IE  ++++I+ AL+RLLPNPNI VLGNTS KRQ +LSFL+Y+T+      ++D+    
Sbjct: 389 NVIEQMEHMYIEAALERLLPNPNIKVLGNTSAKRQAILSFLVYSTTNSSSDGMKDSRGDI 448

Query: 46  ----YIWREKATKKDKPVH 2
               Y+WRE   K+ KP+H
Sbjct: 449 EGRFYMWRETGNKRGKPLH 467


>ref|XP_002274757.2| PREDICTED: probable cysteine desulfurase-like [Vitis vinifera]
          Length = 636

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
 Frame = -2

Query: 220 HLIETQDNLWIDRALQRLLPNPNINVLGNTSVKRQPVLSFLIYTT----SLDEEKEIRDT 53
           ++IE ++N + + AL+RLLPNPNI VLGNT+ KRQ +LSFL+Y+T    S D  +E    
Sbjct: 390 NVIEEEENNYTEAALERLLPNPNIWVLGNTTAKRQAILSFLVYSTTNSASDDMSREETKG 449

Query: 52  SAYIWREKATKKDKPVH 2
             Y+WRE   +KDKP+H
Sbjct: 450 RFYMWRETGNRKDKPLH 466


>ref|XP_003630258.1| Cysteine desulfurase [Medicago truncatula]
           gi|355524280|gb|AET04734.1| Cysteine desulfurase
           [Medicago truncatula]
          Length = 645

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
 Frame = -2

Query: 214 IETQDNLWIDRALQRLLPNPNINVLGNTSVKRQPVLSFLIYTT-----SLDEEKEIRDTS 50
           IE ++ L+I++AL+RL+ NPNI +LGN + KRQ +LSFLIY+T     S+D   +  +  
Sbjct: 393 IEKREQLYINKALKRLVTNPNIKILGNLNAKRQAILSFLIYSTTNSCSSIDSSSQEHEGE 452

Query: 49  AYIWREKATKKDKPVH 2
             +W+E   ++ KP+H
Sbjct: 453 LNLWQEMGNQRGKPLH 468


>ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|222838033|gb|EEE76398.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/72 (48%), Positives = 44/72 (61%)
 Frame = -2

Query: 217 LIETQDNLWIDRALQRLLPNPNINVLGNTSVKRQPVLSFLIYTTSLDEEKEIRDTSAYIW 38
           +IE Q+N++I +AL RLLPN NI VLGNTS KRQ +L            K I D   Y+W
Sbjct: 327 VIEEQENMYIAKALDRLLPNKNIWVLGNTSAKRQAIL------------KNINDEVLYMW 374

Query: 37  REKATKKDKPVH 2
            E   K+DKP+H
Sbjct: 375 GEVGNKRDKPLH 386


>ref|XP_002531673.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223528704|gb|EEF30717.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 598

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
 Frame = -2

Query: 217 LIETQDNLWIDRALQRLLPNPNINVLGNTSVKRQPVLSFLIYTT-----SLDEEKEIR-D 56
           +IE Q++ ++ +AL+RL  N NI +LGN S KRQ +LSFLI++T     S D   E + +
Sbjct: 348 VIEEQEHKYLSKALKRLKYNKNIGILGNISAKRQAILSFLIFSTTNSSSSKDPSSERKEE 407

Query: 55  TSAYIWREKATKKDKPVH 2
            + Y+W E   K+DKP+H
Sbjct: 408 DNLYMWAETGNKRDKPLH 425


Top