BLASTX nr result

ID: Coptis24_contig00039399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039399
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298277.1| NAC domain protein, IPR003441 [Populus trich...   107   1e-21
ref|XP_002523834.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
ref|XP_002309417.1| NAC domain protein, IPR003441 [Populus trich...   106   2e-21
emb|CBI39321.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002266232.1| PREDICTED: NAC domain-containing protein 90-...   103   1e-20

>ref|XP_002298277.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|224149083|ref|XP_002336754.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
           gi|222836661|gb|EEE75054.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
           gi|222845535|gb|EEE83082.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 246

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 56/71 (78%)
 Frame = -2

Query: 215 MDERPPGFRFFPTEVELISFYLRNKLEGIGVDEFQRIIPVVDIYEFDPWDLPEISGELCH 36
           M+E P G+RF+PTE ELISFYL NKL G   +  QR+IP + IY+ +PWDLP++SGELC 
Sbjct: 1   MEELPLGYRFYPTEEELISFYLHNKLGGGRQERLQRVIPDISIYDIEPWDLPKLSGELCQ 60

Query: 35  GDPEQWFFFTP 3
           GD EQWFFFTP
Sbjct: 61  GDTEQWFFFTP 71


>ref|XP_002523834.1| conserved hypothetical protein [Ricinus communis]
           gi|223536922|gb|EEF38560.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 240

 Score =  106 bits (264), Expect = 2e-21
 Identities = 44/71 (61%), Positives = 56/71 (78%)
 Frame = -2

Query: 215 MDERPPGFRFFPTEVELISFYLRNKLEGIGVDEFQRIIPVVDIYEFDPWDLPEISGELCH 36
           M+E PPGFRF+PTE EL+SFYL NKLEG   +   ++IP +DI   +PW+LP+++GELC 
Sbjct: 1   MEELPPGFRFYPTEEELVSFYLLNKLEGKRQERLNQVIPAIDICSTEPWELPKLAGELCQ 60

Query: 35  GDPEQWFFFTP 3
           GD EQWFFFTP
Sbjct: 61  GDTEQWFFFTP 71


>ref|XP_002309417.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222855393|gb|EEE92940.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 268

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/68 (67%), Positives = 56/68 (82%), Gaps = 3/68 (4%)
 Frame = -2

Query: 203 PPGFRFFPTEVELISFYLRNKLEGIGVDEFQ---RIIPVVDIYEFDPWDLPEISGELCHG 33
           PPGFRF+PTE EL+SFYL NKLE    D  +   R+IPV+DIYEF+PW+LP+ SG+LCHG
Sbjct: 3   PPGFRFYPTEEELVSFYLHNKLEARREDLLRVMDRLIPVLDIYEFNPWELPQFSGDLCHG 62

Query: 32  DPEQWFFF 9
           DPE+WFFF
Sbjct: 63  DPEEWFFF 70


>emb|CBI39321.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = -2

Query: 215 MDERPPGFRFFPTEVELISFYLRNKLEGIGVDEFQRIIPVVDIYEFDPWDLPEISGELCH 36
           M++ PPGFRF+PTE EL+SFYLR KL+G  + E  R+IP V+IYE +PW LP +SGE+C 
Sbjct: 1   MEDLPPGFRFYPTEEELVSFYLRMKLQGKRLQELNRVIPDVNIYELEPWHLPRLSGEVCR 60

Query: 35  GDPEQWFFFTP 3
            D EQWFFF P
Sbjct: 61  RDTEQWFFFIP 71


>ref|XP_002266232.1| PREDICTED: NAC domain-containing protein 90-like [Vitis vinifera]
          Length = 247

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = -2

Query: 215 MDERPPGFRFFPTEVELISFYLRNKLEGIGVDEFQRIIPVVDIYEFDPWDLPEISGELCH 36
           M++ PPGFRF+PTE EL+SFYLR KL+G  + E  R+IP V+IYE +PW LP +SGE+C 
Sbjct: 1   MEDLPPGFRFYPTEEELVSFYLRMKLQGKRLQELNRVIPDVNIYELEPWHLPRLSGEVCR 60

Query: 35  GDPEQWFFFTP 3
            D EQWFFF P
Sbjct: 61  RDTEQWFFFIP 71


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