BLASTX nr result

ID: Coptis24_contig00039388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039388
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524414.1| nucleotide binding protein, putative [Ricinu...    82   4e-14
ref|XP_003616192.1| hypothetical protein MTR_5g077160 [Medicago ...    80   2e-13
ref|XP_003590366.1| hypothetical protein MTR_1g059090 [Medicago ...    79   4e-13
ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853...    77   2e-12
emb|CBI23078.3| unnamed protein product [Vitis vinifera]               77   2e-12

>ref|XP_002524414.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223536298|gb|EEF37949.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 847

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 43/80 (53%), Positives = 53/80 (66%)
 Frame = +2

Query: 14  SLKIWEVDTEELLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGS 193
           S+KIW    E LL SSE N +   LL EV P+   PVSVLS+  P +++ K+LLAVG+GS
Sbjct: 388 SVKIWLGSGEILLDSSESNKTPFFLLKEVIPSDFVPVSVLSIKIPVQAVEKMLLAVGKGS 447

Query: 194 GLLEVWICDISSCEFQISGS 253
           G  +VW CDIS CEF   GS
Sbjct: 448 GSFDVWTCDISGCEFSKCGS 467


>ref|XP_003616192.1| hypothetical protein MTR_5g077160 [Medicago truncatula]
           gi|355517527|gb|AES99150.1| hypothetical protein
           MTR_5g077160 [Medicago truncatula]
          Length = 470

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/80 (51%), Positives = 56/80 (70%)
 Frame = +2

Query: 14  SLKIWEVDTEELLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGS 193
           S+K+W  DT++LL SSE++ +S  LL EV    + PVSVLS+T   +   K+LLA+G+ S
Sbjct: 311 SVKVWLGDTDKLLKSSEVDQTSFLLLKEVITVNAVPVSVLSVTVHVQYPSKMLLAIGKVS 370

Query: 194 GLLEVWICDISSCEFQISGS 253
           G +E+WICDISS EF   GS
Sbjct: 371 GSIEIWICDISSREFDKLGS 390


>ref|XP_003590366.1| hypothetical protein MTR_1g059090 [Medicago truncatula]
           gi|355479414|gb|AES60617.1| hypothetical protein
           MTR_1g059090 [Medicago truncatula]
          Length = 857

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/80 (50%), Positives = 56/80 (70%)
 Frame = +2

Query: 14  SLKIWEVDTEELLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGS 193
           S+K+W  D ++LL SSE++ +S  LL EV  A + PVSVLS+T   +   K+LLA+G+ S
Sbjct: 314 SVKVWLGDNDKLLKSSEVDPNSFLLLKEVITANAVPVSVLSVTVHVQYPSKMLLAIGKVS 373

Query: 194 GLLEVWICDISSCEFQISGS 253
           G +E+W+CDISS EF   GS
Sbjct: 374 GSIEIWLCDISSREFDKLGS 393


>ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera]
          Length = 864

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 52/80 (65%)
 Frame = +2

Query: 14  SLKIWEVDTEELLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGS 193
           S+KIW   +E+LL SSE+N     LL EV  A S PVSVL+L  P +S  K+ LAVG+G 
Sbjct: 326 SVKIWLEYSEKLLKSSEVNDPPFSLLKEVINADSVPVSVLTLIVPVQSPQKMFLAVGKGC 385

Query: 194 GLLEVWICDISSCEFQISGS 253
           G  EVWICD+S  +F   GS
Sbjct: 386 GSFEVWICDLSIRKFDRIGS 405


>emb|CBI23078.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 52/80 (65%)
 Frame = +2

Query: 14  SLKIWEVDTEELLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGS 193
           S+KIW   +E+LL SSE+N     LL EV  A S PVSVL+L  P +S  K+ LAVG+G 
Sbjct: 262 SVKIWLEYSEKLLKSSEVNDPPFSLLKEVINADSVPVSVLTLIVPVQSPQKMFLAVGKGC 321

Query: 194 GLLEVWICDISSCEFQISGS 253
           G  EVWICD+S  +F   GS
Sbjct: 322 GSFEVWICDLSIRKFDRIGS 341


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