BLASTX nr result

ID: Coptis24_contig00039370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039370
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS91357.1| polyprotein [Coix lacryma-jobi]                         82   6e-14
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                    77   2e-12
ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256...    77   2e-12
ref|XP_002440855.1| hypothetical protein SORBIDRAFT_09g008991 [S...    76   2e-12
ref|XP_002440870.1| hypothetical protein SORBIDRAFT_09g010571 [S...    75   6e-12

>gb|ACS91357.1| polyprotein [Coix lacryma-jobi]
          Length = 966

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/91 (48%), Positives = 53/91 (58%)
 Frame = +2

Query: 2   PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181
           PVS+ AYR+APK L E+K Q++ELL+KG                              FI
Sbjct: 412 PVSRRAYRMAPKELAELKTQLQELLEKG------------------------------FI 441

Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274
           RPS+SPWG PAIFV KKD TLRMC+D+R LN
Sbjct: 442 RPSSSPWGCPAIFVKKKDKTLRMCVDYRPLN 472


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/91 (42%), Positives = 52/91 (57%)
 Frame = +2

Query: 2   PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181
           P+SK+ YR+AP  ++E+K Q+EELL KG                              +I
Sbjct: 592 PISKATYRMAPAEMNELKNQLEELLDKG------------------------------YI 621

Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274
           RPS SPWG P +FV KKDG+LR+CID+R+LN
Sbjct: 622 RPSMSPWGAPVLFVKKKDGSLRLCIDYRELN 652


>ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256661 [Vitis vinifera]
          Length = 1855

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/91 (43%), Positives = 52/91 (57%)
 Frame = +2

Query: 2    PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181
            P+SK+ YR+AP  L E+KVQ++ELL KG                              FI
Sbjct: 1579 PMSKAPYRMAPVELKELKVQLQELLDKG------------------------------FI 1608

Query: 182  RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274
            RPS SPWG P +FV KKDG++R+CID+R+LN
Sbjct: 1609 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELN 1639


>ref|XP_002440855.1| hypothetical protein SORBIDRAFT_09g008991 [Sorghum bicolor]
           gi|241946140|gb|EES19285.1| hypothetical protein
           SORBIDRAFT_09g008991 [Sorghum bicolor]
          Length = 329

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/91 (42%), Positives = 53/91 (58%)
 Frame = +2

Query: 2   PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181
           P+S+ +YR+APK L E+K Q++ELL+KG                              FI
Sbjct: 2   PISRRSYRMAPKELVELKTQLQELLQKG------------------------------FI 31

Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274
           +PS+SPWG PA+FV KKD TLR+C+D+R LN
Sbjct: 32  QPSSSPWGCPALFVKKKDQTLRLCVDYRPLN 62


>ref|XP_002440870.1| hypothetical protein SORBIDRAFT_09g010571 [Sorghum bicolor]
           gi|241946155|gb|EES19300.1| hypothetical protein
           SORBIDRAFT_09g010571 [Sorghum bicolor]
          Length = 386

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/91 (42%), Positives = 52/91 (57%)
 Frame = +2

Query: 2   PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181
           P+S+ AYR+APK L E+K Q++ELL+K                               FI
Sbjct: 13  PISRRAYRMAPKELAELKTQLQELLQKD------------------------------FI 42

Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274
           +PS+SPWG PA+FV KKD TLR+C+D+R LN
Sbjct: 43  QPSSSPWGCPALFVKKKDQTLRLCVDYRPLN 73


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