BLASTX nr result
ID: Coptis24_contig00039370
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039370 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACS91357.1| polyprotein [Coix lacryma-jobi] 82 6e-14 gb|AEV42258.1| hypothetical protein [Beta vulgaris] 77 2e-12 ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256... 77 2e-12 ref|XP_002440855.1| hypothetical protein SORBIDRAFT_09g008991 [S... 76 2e-12 ref|XP_002440870.1| hypothetical protein SORBIDRAFT_09g010571 [S... 75 6e-12 >gb|ACS91357.1| polyprotein [Coix lacryma-jobi] Length = 966 Score = 81.6 bits (200), Expect = 6e-14 Identities = 44/91 (48%), Positives = 53/91 (58%) Frame = +2 Query: 2 PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181 PVS+ AYR+APK L E+K Q++ELL+KG FI Sbjct: 412 PVSRRAYRMAPKELAELKTQLQELLEKG------------------------------FI 441 Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274 RPS+SPWG PAIFV KKD TLRMC+D+R LN Sbjct: 442 RPSSSPWGCPAIFVKKKDKTLRMCVDYRPLN 472 >gb|AEV42258.1| hypothetical protein [Beta vulgaris] Length = 1553 Score = 76.6 bits (187), Expect = 2e-12 Identities = 39/91 (42%), Positives = 52/91 (57%) Frame = +2 Query: 2 PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181 P+SK+ YR+AP ++E+K Q+EELL KG +I Sbjct: 592 PISKATYRMAPAEMNELKNQLEELLDKG------------------------------YI 621 Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274 RPS SPWG P +FV KKDG+LR+CID+R+LN Sbjct: 622 RPSMSPWGAPVLFVKKKDGSLRLCIDYRELN 652 >ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256661 [Vitis vinifera] Length = 1855 Score = 76.6 bits (187), Expect = 2e-12 Identities = 40/91 (43%), Positives = 52/91 (57%) Frame = +2 Query: 2 PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181 P+SK+ YR+AP L E+KVQ++ELL KG FI Sbjct: 1579 PMSKAPYRMAPVELKELKVQLQELLDKG------------------------------FI 1608 Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274 RPS SPWG P +FV KKDG++R+CID+R+LN Sbjct: 1609 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELN 1639 >ref|XP_002440855.1| hypothetical protein SORBIDRAFT_09g008991 [Sorghum bicolor] gi|241946140|gb|EES19285.1| hypothetical protein SORBIDRAFT_09g008991 [Sorghum bicolor] Length = 329 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/91 (42%), Positives = 53/91 (58%) Frame = +2 Query: 2 PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181 P+S+ +YR+APK L E+K Q++ELL+KG FI Sbjct: 2 PISRRSYRMAPKELVELKTQLQELLQKG------------------------------FI 31 Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274 +PS+SPWG PA+FV KKD TLR+C+D+R LN Sbjct: 32 QPSSSPWGCPALFVKKKDQTLRLCVDYRPLN 62 >ref|XP_002440870.1| hypothetical protein SORBIDRAFT_09g010571 [Sorghum bicolor] gi|241946155|gb|EES19300.1| hypothetical protein SORBIDRAFT_09g010571 [Sorghum bicolor] Length = 386 Score = 75.1 bits (183), Expect = 6e-12 Identities = 39/91 (42%), Positives = 52/91 (57%) Frame = +2 Query: 2 PVSKSAYRLAPKLLDEMKVQVEELLKKG*EFNV*CFCFWHNHIF*VYGFESFKVCMTRFI 181 P+S+ AYR+APK L E+K Q++ELL+K FI Sbjct: 13 PISRRAYRMAPKELAELKTQLQELLQKD------------------------------FI 42 Query: 182 RPSNSPWGVPAIFVSKKDGTLRMCIDFRDLN 274 +PS+SPWG PA+FV KKD TLR+C+D+R LN Sbjct: 43 QPSSSPWGCPALFVKKKDQTLRLCVDYRPLN 73