BLASTX nr result

ID: Coptis24_contig00039358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039358
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272942.2| PREDICTED: momilactone A synthase-like [Viti...   303   2e-80
ref|XP_002320953.1| predicted protein [Populus trichocarpa] gi|2...   291   5e-77
ref|XP_002515215.1| short chain alcohol dehydrogenase, putative ...   286   1e-75
ref|XP_003521608.1| PREDICTED: sex determination protein tassels...   275   4e-72
gb|ACU22781.1| unknown [Glycine max]                                  275   4e-72

>ref|XP_002272942.2| PREDICTED: momilactone A synthase-like [Vitis vinifera]
          Length = 262

 Score =  303 bits (775), Expect = 2e-80
 Identities = 144/185 (77%), Positives = 165/185 (89%)
 Frame = +2

Query: 11  RLNGKVAIITGAASGIGEATARLFVENGAFVVIADVQDELGHQVVESIGAEKASYRHCDV 190
           RL GKVA++TGAASGIGE   RLF ENGAFVV+ADVQDELGHQV+ SIG+EK SYRHCDV
Sbjct: 5   RLEGKVALVTGAASGIGEEAVRLFAENGAFVVVADVQDELGHQVISSIGSEKVSYRHCDV 64

Query: 191 RDEKQVEEIVAYTMDKYGGLDIMFSNAGVIGAIHGILELDMEAFDNTMAINVRGVALTMK 370
           RDEKQVEE VAYT+DKYG LD++FSNAG+IG + GILELD++ FDNTMA NVRGVA T+K
Sbjct: 65  RDEKQVEETVAYTLDKYGSLDVLFSNAGIIGPLTGILELDLQGFDNTMATNVRGVAATIK 124

Query: 371 YAARAMVAKQIRGSIICTASVAACIGGSGPHAYTTSKHAVVGLVRSVCSELGEYGIRVNS 550
           +AARAMVA+ IRGSIICT SVAA +GG+GPHAYTTSKHA++GLVR+ CSELG YGIRVN 
Sbjct: 125 HAARAMVARSIRGSIICTTSVAAALGGAGPHAYTTSKHALIGLVRAACSELGAYGIRVNC 184

Query: 551 ISPFG 565
           +SPFG
Sbjct: 185 VSPFG 189


>ref|XP_002320953.1| predicted protein [Populus trichocarpa] gi|222861726|gb|EEE99268.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  291 bits (745), Expect = 5e-77
 Identities = 142/185 (76%), Positives = 162/185 (87%)
 Frame = +2

Query: 11  RLNGKVAIITGAASGIGEATARLFVENGAFVVIADVQDELGHQVVESIGAEKASYRHCDV 190
           RL GKVA+ITGAASGIGE   +LFVENG FVV ADVQD+LGHQVV SIGA++A+YRHCDV
Sbjct: 5   RLEGKVALITGAASGIGEEAVKLFVENGGFVVAADVQDDLGHQVVASIGADRATYRHCDV 64

Query: 191 RDEKQVEEIVAYTMDKYGGLDIMFSNAGVIGAIHGILELDMEAFDNTMAINVRGVALTMK 370
           RDEKQVEE V Y MDKYG LD++FSNAG+IG + GILELD+E FDNTMA NVRGVA T+K
Sbjct: 65  RDEKQVEETVKYIMDKYGKLDVLFSNAGIIGPLTGILELDIEGFDNTMATNVRGVAATIK 124

Query: 371 YAARAMVAKQIRGSIICTASVAACIGGSGPHAYTTSKHAVVGLVRSVCSELGEYGIRVNS 550
           +AARAMV+K IRGSIICT SVA+ + G+GPHAYTTSKHA+VGLVR+ CSELG YGIRVN 
Sbjct: 125 HAARAMVSKNIRGSIICTTSVASSLAGTGPHAYTTSKHALVGLVRAACSELGAYGIRVNC 184

Query: 551 ISPFG 565
           ISP+G
Sbjct: 185 ISPYG 189


>ref|XP_002515215.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223545695|gb|EEF47199.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 271

 Score =  286 bits (733), Expect = 1e-75
 Identities = 137/186 (73%), Positives = 161/186 (86%)
 Frame = +2

Query: 8   VRLNGKVAIITGAASGIGEATARLFVENGAFVVIADVQDELGHQVVESIGAEKASYRHCD 187
           + L GKVA+ITGAASGIGE   RLFVENGAFV+ ADVQD+LG +VVES+G +KA+YRHCD
Sbjct: 17  ILLGGKVALITGAASGIGEQAVRLFVENGAFVIAADVQDDLGQEVVESVGTDKATYRHCD 76

Query: 188 VRDEKQVEEIVAYTMDKYGGLDIMFSNAGVIGAIHGILELDMEAFDNTMAINVRGVALTM 367
           VRDEKQVEE V Y ++KYG LD++FSNAG++G + GILELD+  FDNTMA NVRGVA T+
Sbjct: 77  VRDEKQVEETVNYAVEKYGKLDVLFSNAGILGPLTGILELDLSGFDNTMATNVRGVAATI 136

Query: 368 KYAARAMVAKQIRGSIICTASVAACIGGSGPHAYTTSKHAVVGLVRSVCSELGEYGIRVN 547
           K+AARAMVAK IRGSIICTASVA+ +GG+GPHAYT SKHA++GLVR+ C ELG YGIRVN
Sbjct: 137 KHAARAMVAKNIRGSIICTASVASSVGGTGPHAYTVSKHAILGLVRTACCELGNYGIRVN 196

Query: 548 SISPFG 565
            ISPFG
Sbjct: 197 CISPFG 202


>ref|XP_003521608.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine
           max]
          Length = 264

 Score =  275 bits (703), Expect = 4e-72
 Identities = 130/185 (70%), Positives = 157/185 (84%)
 Frame = +2

Query: 11  RLNGKVAIITGAASGIGEATARLFVENGAFVVIADVQDELGHQVVESIGAEKASYRHCDV 190
           RL GKVA+ITGAASGIGE T RLF E+GA +V AD+QDE GHQV  SIG+E+ +Y HCDV
Sbjct: 5   RLEGKVALITGAASGIGEETVRLFAEHGALIVAADIQDEQGHQVAASIGSERVTYHHCDV 64

Query: 191 RDEKQVEEIVAYTMDKYGGLDIMFSNAGVIGAIHGILELDMEAFDNTMAINVRGVALTMK 370
           RDE QVEE + +T++K+G +D++FSNAG+IG++ GIL+LD+  FDNT+A NVRGVA T+K
Sbjct: 65  RDENQVEETIKFTLEKHGRIDVLFSNAGIIGSLSGILDLDLNEFDNTIATNVRGVAATIK 124

Query: 371 YAARAMVAKQIRGSIICTASVAACIGGSGPHAYTTSKHAVVGLVRSVCSELGEYGIRVNS 550
           + ARAMVAK  RGSIICT SVAA IGG+GPH YTTSKHA++GLV+S CSELG YGIRVNS
Sbjct: 125 HTARAMVAKSTRGSIICTTSVAAMIGGTGPHGYTTSKHALLGLVKSACSELGAYGIRVNS 184

Query: 551 ISPFG 565
           ISPFG
Sbjct: 185 ISPFG 189


>gb|ACU22781.1| unknown [Glycine max]
          Length = 264

 Score =  275 bits (703), Expect = 4e-72
 Identities = 130/185 (70%), Positives = 157/185 (84%)
 Frame = +2

Query: 11  RLNGKVAIITGAASGIGEATARLFVENGAFVVIADVQDELGHQVVESIGAEKASYRHCDV 190
           RL GKVA+ITGAASGIGE T RLF E+GA +V AD+QDE GHQV  SIG+E+ +Y HCDV
Sbjct: 5   RLEGKVALITGAASGIGEETVRLFAEHGALIVAADIQDEQGHQVAASIGSERVTYHHCDV 64

Query: 191 RDEKQVEEIVAYTMDKYGGLDIMFSNAGVIGAIHGILELDMEAFDNTMAINVRGVALTMK 370
           RDE QVEE + +T++K+G +D++FSNAG+IG++ GIL+LD+  FDNT+A NVRGVA T+K
Sbjct: 65  RDENQVEETIKFTLEKHGRIDVLFSNAGIIGSLSGILDLDLNEFDNTIATNVRGVAATIK 124

Query: 371 YAARAMVAKQIRGSIICTASVAACIGGSGPHAYTTSKHAVVGLVRSVCSELGEYGIRVNS 550
           + ARAMVAK  RGSIICT SVAA IGG+GPH YTTSKHA++GLV+S CSELG YGIRVNS
Sbjct: 125 HTARAMVAKSTRGSIICTTSVAAMIGGTGPHGYTTSKHALLGLVKSACSELGAYGIRVNS 184

Query: 551 ISPFG 565
           ISPFG
Sbjct: 185 ISPFG 189


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