BLASTX nr result

ID: Coptis24_contig00039344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039344
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodies...    62   4e-08
ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|AFK48833.1| unknown [Medicago truncatula]                           58   7e-07
ref|XP_002512887.1| glycerophosphodiester phosphodiesterase, put...    57   1e-06

>ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|222839360|gb|EEE77697.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
 Frame = +2

Query: 2   DFVKEIAEAVSDITNPIQVGEEENI----GEEMVTKRPKFSQLELSFLLKLIPELVQ 160
           D V+EI EAVSD+  P ++GE E++    GE  V  +P+FSQ+ELSFLLKLIPEL+Q
Sbjct: 325 DLVQEITEAVSDLIKPSKMGEAESLAEGDGEMEVKSKPQFSQMELSFLLKLIPELIQ 381


>ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodiesterase GDE1 [Vitis
           vinifera] gi|147820259|emb|CAN71478.1| hypothetical
           protein VITISV_038621 [Vitis vinifera]
          Length = 382

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 4/56 (7%)
 Frame = +2

Query: 2   DFVKEIAEAVSDITNPIQVGEEEN----IGEEMVTKRPKFSQLELSFLLKLIPELV 157
           D VKEI EAVSD+  P + G+EE+    +G+  V  +P+FSQ ELSFLLKLIPEL+
Sbjct: 325 DLVKEITEAVSDLMKPSKEGDEESLPEGVGQMQVKSKPQFSQRELSFLLKLIPELI 380


>ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|222845909|gb|EEE83456.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
 Frame = +2

Query: 2   DFVKEIAEAVSDITNPIQVGEEENIGE---EMVTK-RPKFSQLELSFLLKLIPELVQY 163
           D V+EI EAVSD+  P +V E E++ E   EM  K +PKFSQ ELSFLLKLIPEL+Q+
Sbjct: 315 DLVQEITEAVSDLIRPSKVEEAESLAEGHDEMEEKSKPKFSQRELSFLLKLIPELIQH 372


>gb|AFK48833.1| unknown [Medicago truncatula]
          Length = 380

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   DFVKEIAEAVSDITNPIQVGEEENIGEEM-VTKRPKFSQLELSFLLKLIPELV 157
           DFV+EI EAV+D+  P ++GEEE + E +    +P+FSQ ELSFL KLIP+L+
Sbjct: 326 DFVQEITEAVADMMKPAKIGEEEGLTEGIGKNSKPQFSQQELSFLYKLIPQLL 378


>ref|XP_002512887.1| glycerophosphodiester phosphodiesterase, putative [Ricinus
           communis] gi|223547898|gb|EEF49390.1|
           glycerophosphodiester phosphodiesterase, putative
           [Ricinus communis]
          Length = 383

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 5/58 (8%)
 Frame = +2

Query: 2   DFVKEIAEAVSDITNPIQVGEEE-NIGE---EMVTKR-PKFSQLELSFLLKLIPELVQ 160
           D VKEI EAVSD+  P +V +EE N+ E   EM  K  P+FSQ ELSFLLKLIP+L+Q
Sbjct: 325 DLVKEITEAVSDMIKPAKVDDEESNLAEKDSEMEMKSIPQFSQKELSFLLKLIPQLIQ 382


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