BLASTX nr result

ID: Coptis24_contig00039342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039342
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247...   105   3e-21
emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]   105   3e-21
ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_003534905.1| PREDICTED: uncharacterized protein LOC100785...    88   6e-16

>ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|222854981|gb|EEE92528.1|
           predicted protein [Populus trichocarpa]
          Length = 896

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = +2

Query: 59  WLQPNKNDSHYKDELIELRRKWNRLCHSLHH-SRPSQIHSPPLSFDSQSLSNKSYNFASP 235
           WLQP   +S+ KDEL+ELRRKWNRLCHSLHH  R S ++S    F++QS+  K+Y+FAS 
Sbjct: 383 WLQPQGTNSNQKDELVELRRKWNRLCHSLHHQGRQSNLNS--TLFNNQSMLGKNYSFASS 440

Query: 236 YSWWPAGSQNSTFPQSNSISFTESTPRPD 322
           Y WWP  SQNS FP SNSISF +S  +P+
Sbjct: 441 YPWWP--SQNSFFPDSNSISFADSALKPN 467


>ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
          Length = 1045

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/91 (53%), Positives = 62/91 (68%)
 Frame = +2

Query: 50  LPYWLQPNKNDSHYKDELIELRRKWNRLCHSLHHSRPSQIHSPPLSFDSQSLSNKSYNFA 229
           LP WLQ +  ++  KD+L+ELRRKWNRLCHSLH  R +Q H     F +Q+L  KSY++ 
Sbjct: 497 LPSWLQAHGVEARQKDDLVELRRKWNRLCHSLHQGRSNQNHLSSSMFSNQNLLGKSYSYT 556

Query: 230 SPYSWWPAGSQNSTFPQSNSISFTESTPRPD 322
           S Y WWP  +QNS FP  NSISFT S  +P+
Sbjct: 557 SSYPWWP--NQNSIFPDLNSISFTNSALKPN 585


>emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
          Length = 1032

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/91 (53%), Positives = 62/91 (68%)
 Frame = +2

Query: 50  LPYWLQPNKNDSHYKDELIELRRKWNRLCHSLHHSRPSQIHSPPLSFDSQSLSNKSYNFA 229
           LP WLQ +  ++  KD+L+ELRRKWNRLCHSLH  R +Q H     F +Q+L  KSY++ 
Sbjct: 484 LPSWLQAHGVEARQKDDLVELRRKWNRLCHSLHQGRSNQNHLSSSMFSNQNLLGKSYSYT 543

Query: 230 SPYSWWPAGSQNSTFPQSNSISFTESTPRPD 322
           S Y WWP  +QNS FP  NSISFT S  +P+
Sbjct: 544 SSYPWWP--NQNSIFPDLNSISFTNSALKPN 572


>ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|222866690|gb|EEF03821.1|
           predicted protein [Populus trichocarpa]
          Length = 899

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
 Frame = +2

Query: 47  NLPYWLQPNKNDSHYKDELIELRRKWNRLCHSLHH-SRPSQIHSPPLSFDSQSLSNKSYN 223
           +LP WLQP   +S  KDE +ELRRKWNRLCHSLHH  R S ++S    + +QSL  K+++
Sbjct: 382 HLPPWLQPQGTNSIQKDEFVELRRKWNRLCHSLHHQGRQSNLNS--TLYSNQSLLGKNFS 439

Query: 224 FASPYSWWPAGSQNSTFPQSNSISFTESTPRPD 322
           FAS Y WWP  SQNS FP SNSISF +S  +P+
Sbjct: 440 FASSYPWWP--SQNSFFPDSNSISFGDSALKPN 470


>ref|XP_003534905.1| PREDICTED: uncharacterized protein LOC100785754 [Glycine max]
          Length = 1051

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = +2

Query: 50  LPYWLQPNKNDSHYKDELIELRRKWNRLCHSLHHSRPSQIH-SPPLSFDSQSLS-NKSYN 223
           LP WLQ +  ++H KDEL +L+RKWNRLCH LH S+  Q H S  L  +  S + NK Y+
Sbjct: 497 LPSWLQSHTTEAHQKDELAQLKRKWNRLCHCLHQSKQPQNHWSNTLHGNYHSSNGNKIYH 556

Query: 224 FASPYSWWPAGSQNSTFPQSNSISFTESTPRP 319
           + S Y WWP     S F  S+SISF +S P+P
Sbjct: 557 YNSSYPWWP-NQGTSVFTDSSSISFADSPPKP 587


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