BLASTX nr result

ID: Coptis24_contig00039311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039311
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -3

Query: 278 SEILKFCLLYEGVYNVTRINEWISTVMRHKLQELDLDIRG-EESFTFRHCLSHFESLTIL 102
           S I++F L  E   + +R+  WIS  +   +++L L++R  E SF   HCL + E+LT L
Sbjct: 95  SNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASFVLPHCLFNCETLTEL 154

Query: 101 KVKFKSVLPIPASFLSSSLRIVRFVDVCFSSD 6
           ++    +L +P+S   S L+I+   +V F+ D
Sbjct: 155 EINMPYILKLPSSISLSCLKILNLYEVIFTDD 186


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