BLASTX nr result

ID: Coptis24_contig00039304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039304
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272451.1| PREDICTED: uncharacterized protein LOC100259...   155   3e-36
ref|XP_002318559.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_004155036.1| PREDICTED: kinesin-like protein KIF2C-like [...   144   6e-33
ref|XP_003525639.1| PREDICTED: kinesin-like protein KIF18B-like ...   142   4e-32
ref|XP_003550852.1| PREDICTED: kinesin-like protein KIF18B-like ...   140   1e-31

>ref|XP_002272451.1| PREDICTED: uncharacterized protein LOC100259414 [Vitis vinifera]
          Length = 761

 Score =  155 bits (392), Expect = 3e-36
 Identities = 83/118 (70%), Positives = 94/118 (79%), Gaps = 2/118 (1%)
 Frame = +3

Query: 3   EIDRMKKEHALQLKQKDNFILDLTRKLSKXXXXXXXXX-IKRVVTRASLQPKEPAAKGEL 179
           E++RMKK+H  QLKQKD+FI DL+RK  K          +KRVVTRASL+PKEP   GEL
Sbjct: 635 EMERMKKDHVFQLKQKDDFIRDLSRKSGKPSEGVVVGQGVKRVVTRASLRPKEPTG-GEL 693

Query: 180 KSPKHWFHSPAPTAKKRSFWDITTANSPSLTSLSGRKTRSHV-AEPARAPSMLLQPGF 350
           KSP H F SPAPTAKKRSFWDITTANSPS+ +L+GRKTRSHV +EPA APSMLLQPGF
Sbjct: 694 KSPSHRFLSPAPTAKKRSFWDITTANSPSVATLNGRKTRSHVISEPAAAPSMLLQPGF 751


>ref|XP_002318559.1| predicted protein [Populus trichocarpa] gi|222859232|gb|EEE96779.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/123 (65%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3    EIDRMKKEHALQLKQKDNFILDLTRKLSKXXXXXXXXXIKRVVTRASLQPKEPAAKGELK 182
            EI+++KK+HA QLK+KD+ I +L+RK  K          KRVVTRASL+PKE    GELK
Sbjct: 663  EIEKLKKDHATQLKEKDDRIHELSRKSEKPSAGGTMQGAKRVVTRASLRPKEKN-NGELK 721

Query: 183  SPKHWFHSPAPTAKKRSFWDITTANSPSLTSLSGRKTRSHVA--EPARAPSMLLQPGFAR 356
            SP H F SP PTAKKRSFWDITTANSPS+ +L+GRKTRSHV     A APSMLLQPGFAR
Sbjct: 722  SPSHRFKSPIPTAKKRSFWDITTANSPSVATLNGRKTRSHVIADNTAAAPSMLLQPGFAR 781

Query: 357  ERP 365
            +RP
Sbjct: 782  QRP 784


>ref|XP_004155036.1| PREDICTED: kinesin-like protein KIF2C-like [Cucumis sativus]
          Length = 759

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/123 (60%), Positives = 89/123 (72%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3    EIDRMKKEHALQLKQKDNFILDLTRKLSKXXXXXXXXXIKRVVTRASLQPKEPAAKGELK 182
            E+++ KKEH +QLKQKD+ I +L +K  K          KR  TR SL+PKEP+  GELK
Sbjct: 638  ELEKTKKEHVVQLKQKDDLIGELLKKSEKTAGLVRGEGAKRAETRTSLRPKEPSI-GELK 696

Query: 183  SPKHWFHSPAPTAKKRSFWDITTANSPSLTSLSGRKTRSHV--AEPARAPSMLLQPGFAR 356
            SP H F SPAPTAKKRSFWDITT NSPS+ +L+GRKTRSHV    P  APSML QPGFAR
Sbjct: 697  SPSHRFKSPAPTAKKRSFWDITTTNSPSVATLNGRKTRSHVLAEPPTAAPSMLRQPGFAR 756

Query: 357  ERP 365
            ++P
Sbjct: 757  QKP 759


>ref|XP_003525639.1| PREDICTED: kinesin-like protein KIF18B-like [Glycine max]
          Length = 732

 Score =  142 bits (357), Expect = 4e-32
 Identities = 79/123 (64%), Positives = 94/123 (76%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   EIDRMKKEHALQLKQKDNFILDLTRKLSKXXXXXXXXXIKRVVTRASLQPKEPAAKGELK 182
           EI++MKK H+LQLKQKD+ I +L++K  K          K VVTR+SL+PKEP    E+K
Sbjct: 610 EIEKMKKNHSLQLKQKDDLIHELSQKGGKQALTTGELG-KGVVTRSSLRPKEPN-NSEMK 667

Query: 183 SPKHWFHSPAPTAKKRSFWDITTANSPSLTSLSGRKTRSHV-AEPAR-APSMLLQPGFAR 356
           SP   F SPAPTAKKRSFWDITT NSPS+T+L+GRKTRSHV AEPA   PSMLLQPGFAR
Sbjct: 668 SPSQRFRSPAPTAKKRSFWDITTTNSPSVTTLNGRKTRSHVLAEPAAPPPSMLLQPGFAR 727

Query: 357 ERP 365
           ++P
Sbjct: 728 QKP 730


>ref|XP_003550852.1| PREDICTED: kinesin-like protein KIF18B-like [Glycine max]
          Length = 709

 Score =  140 bits (352), Expect = 1e-31
 Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   EIDRMKKEHALQLKQKDNFILDLTRKLSKXXXXXXXXXIKRVVTRASLQPKEPAAKGELK 182
           EI++M+K+H+LQLKQKD+ I +L++K  K          K VVTR+S++PKEP    E+K
Sbjct: 587 EIEKMRKDHSLQLKQKDDLIRELSQKGGKQALATGELG-KGVVTRSSIRPKEPN-NSEMK 644

Query: 183 SPKHWFHSPAPTAKKRSFWDITTANSPSLTSLSGRKTRSHV-AEPAR-APSMLLQPGFAR 356
           SP   F SPAPTAKKRSFWDITT NSPS+T+++GRKTRSHV AEPA   PSMLLQPGFAR
Sbjct: 645 SPSQRFRSPAPTAKKRSFWDITTTNSPSVTTVNGRKTRSHVLAEPAAPPPSMLLQPGFAR 704

Query: 357 ERP 365
           ++P
Sbjct: 705 QKP 707


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