BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039291
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [S...    66   3e-09
tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea m...    61   1e-07
gb|AFG65217.1| Pinus taeda anonymous locus 0_10195_01 genomic se...    59   5e-07
ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
gb|AFG65219.1| Pinus taeda anonymous locus 0_10195_01 genomic se...    58   7e-07

>ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [Sorghum bicolor]
           gi|241930143|gb|EES03288.1| hypothetical protein
           SORBIDRAFT_03g028130 [Sorghum bicolor]
          Length = 694

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = -3

Query: 498 DMGVIKSPGYSWIEVS-GEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGYRP 340
           D G+ K PGYSWIEV   E H FLTADK H QS  IY  L GLT+ L+ EGY P
Sbjct: 631 DKGIKKCPGYSWIEVGDSEVHRFLTADKLHTQSHQIYRVLGGLTQQLMDEGYEP 684


>tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea mays]
          Length = 696

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/52 (61%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 498 DMGVIKSPGYSWIEV-SGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGY 346
           D GV K PGYSWIE    E H FLTADK H QS  IY  L GLT+ L+ EGY
Sbjct: 635 DNGVKKCPGYSWIEGRDSEVHRFLTADKLHSQSHQIYEVLGGLTEQLMDEGY 686


>gb|AFG65217.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
          Length = 136

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = -3

Query: 492 GVIKSPGYSWIEVSGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGYRP 340
           G+ K PGYSWIEV  + H+F+  D++H Q+  IY TL+ LT+ +   GY P
Sbjct: 10  GIQKKPGYSWIEVKNKVHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMP 60


>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 478

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = -3

Query: 498 DMGVIKSPGYSWIEVSGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGY 346
           +MGV K PG SWI+++G  HNF+  D THK S  IY TL  +TK    EGY
Sbjct: 416 EMGVKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVTKQANLEGY 466


>gb|AFG65219.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
           gi|383164871|gb|AFG65231.1| Pinus taeda anonymous locus
           0_10195_01 genomic sequence gi|383164873|gb|AFG65232.1|
           Pinus taeda anonymous locus 0_10195_01 genomic sequence
           gi|383164875|gb|AFG65233.1| Pinus taeda anonymous locus
           0_10195_01 genomic sequence
          Length = 136

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = -3

Query: 492 GVIKSPGYSWIEVSGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGYRP 340
           G+ K PGYSWIEV    H+F+  D++H Q+  IY TL+ LT+ +   GY P
Sbjct: 10  GIQKKPGYSWIEVKNRVHSFMVNDRSHPQTQEIYTTLESLTEQIKEVGYMP 60