BLASTX nr result

ID: Coptis24_contig00039288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039288
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94412.1| unknown [Populus trichocarpa]                           82   1e-16
ref|XP_002440402.1| hypothetical protein SORBIDRAFT_09g000390 [S...    81   5e-16
ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...    81   6e-16
ref|XP_003520840.1| PREDICTED: uncharacterized protein LOC100798...    81   8e-16
gb|AFW82937.1| ankyrin-1 [Zea mays]                                    80   8e-16

>gb|ABK94412.1| unknown [Populus trichocarpa]
          Length = 167

 Score = 82.4 bits (202), Expect(2) = 1e-16
 Identities = 41/79 (51%), Positives = 52/79 (65%)
 Frame = -3

Query: 245 AILKDPLNATLLSNRGLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWSILEKFD 66
           AI  DP NA +LSNR LC+ R    ++AL DA  C  LKPDWPKA YR G A  +L++FD
Sbjct: 67  AIDLDPTNAAVLSNRSLCWIRLGKPDQALADAKACRELKPDWPKAWYREGAALRLLQRFD 126

Query: 65  AAALEFAVALQLDPGNQDL 9
            AA  F   ++LDP N++L
Sbjct: 127 EAANSFYEGVKLDPENKEL 145



 Score = 28.9 bits (63), Expect(2) = 1e-16
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -1

Query: 310 AEAKSKEEDAFRKNDYFAA 254
           AEAKS+ +DAF++N+Y  A
Sbjct: 42  AEAKSRGDDAFKRNEYLTA 60


>ref|XP_002440402.1| hypothetical protein SORBIDRAFT_09g000390 [Sorghum bicolor]
           gi|241945687|gb|EES18832.1| hypothetical protein
           SORBIDRAFT_09g000390 [Sorghum bicolor]
          Length = 460

 Score = 81.3 bits (199), Expect(2) = 5e-16
 Identities = 39/75 (52%), Positives = 50/75 (66%)
 Frame = -3

Query: 233 DPLNATLLSNRGLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWSILEKFDAAAL 54
           DP +AT+LSNR LC+ R     RALEDA  C  L+PDW KA YR G A  +L++F+ AA 
Sbjct: 362 DPTDATVLSNRSLCWLRAGQAERALEDAKACRALRPDWAKACYREGAAHRLLQRFEDAAN 421

Query: 53  EFAVALQLDPGNQDL 9
            F   +QLDP N++L
Sbjct: 422 AFYEGVQLDPENKEL 436



 Score = 27.7 bits (60), Expect(2) = 5e-16
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 307 EAKSKEEDAFRKNDYFAA 254
           EAKS+ +DAFR+ DY  A
Sbjct: 334 EAKSRGDDAFRRKDYLVA 351


>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
           unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 80.9 bits (198), Expect(2) = 6e-16
 Identities = 42/81 (51%), Positives = 51/81 (62%)
 Frame = -3

Query: 245 AILKDPLNATLLSNRGLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWSILEKFD 66
           AI  DP +ATLLSNR LC+ R      AL+DA  C  L+PDW KA YR G A  +L KFD
Sbjct: 358 AIDVDPTDATLLSNRSLCWIRLGQAEHALDDAKACRALRPDWSKACYREGAALRLLLKFD 417

Query: 65  AAALEFAVALQLDPGNQDLRN 3
            AA  F   ++LDP N++L N
Sbjct: 418 EAANSFYEGVKLDPENKELVN 438



 Score = 27.7 bits (60), Expect(2) = 6e-16
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 310 AEAKSKEEDAFRKNDYFAA 254
           AEAKS+ +DAF+  DY+ A
Sbjct: 333 AEAKSRGDDAFKAKDYYMA 351


>ref|XP_003520840.1| PREDICTED: uncharacterized protein LOC100798118 [Glycine max]
          Length = 678

 Score = 81.3 bits (199), Expect(2) = 8e-16
 Identities = 41/81 (50%), Positives = 52/81 (64%)
 Frame = -3

Query: 245 AILKDPLNATLLSNRGLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWSILEKFD 66
           AI  +P +ATLLSNR LC+ +      AL DA  C  L+PDWPKA YR G A  +L+KFD
Sbjct: 578 AIDLNPTDATLLSNRSLCWIKLGQAEHALADAKACRALRPDWPKACYREGAALRLLQKFD 637

Query: 65  AAALEFAVALQLDPGNQDLRN 3
            AA  F   ++LDP N++L N
Sbjct: 638 EAANAFYEGVKLDPENKELVN 658



 Score = 26.9 bits (58), Expect(2) = 8e-16
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = -1

Query: 310 AEAKSKEEDAFRKNDYFAA 254
           AE+KS+ ++AF++NDY  A
Sbjct: 553 AESKSRGDEAFKRNDYHMA 571


>gb|AFW82937.1| ankyrin-1 [Zea mays]
          Length = 456

 Score = 80.5 bits (197), Expect(2) = 8e-16
 Identities = 39/77 (50%), Positives = 50/77 (64%)
 Frame = -3

Query: 233 DPLNATLLSNRGLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWSILEKFDAAAL 54
           DP +AT+LSNR LC+ R     RALEDA  C  L+PDW KA YR G A  +L++F+ AA 
Sbjct: 358 DPTDATVLSNRSLCWLRAGQAERALEDAKACRALRPDWAKACYREGAAHRLLQRFEEAAN 417

Query: 53  EFAVALQLDPGNQDLRN 3
            F   +QL+P N +L N
Sbjct: 418 AFYEGVQLEPENTELVN 434



 Score = 27.7 bits (60), Expect(2) = 8e-16
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 307 EAKSKEEDAFRKNDYFAA 254
           EAKS+ +DAFR+ DY  A
Sbjct: 330 EAKSRGDDAFRRKDYLVA 347


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