BLASTX nr result

ID: Coptis24_contig00039245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039245
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271515.2| PREDICTED: probable lysine-specific demethyl...   137   2e-30
emb|CBI39010.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_002529883.1| transcription factor, putative [Ricinus comm...   101   1e-19
ref|XP_003532801.1| PREDICTED: probable lysine-specific demethyl...   100   2e-19
ref|XP_004135564.1| PREDICTED: probable lysine-specific demethyl...    95   1e-17

>ref|XP_002271515.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1118

 Score =  137 bits (344), Expect = 2e-30
 Identities = 78/177 (44%), Positives = 106/177 (59%), Gaps = 9/177 (5%)
 Frame = -3

Query: 650  EMVVDRLNKEISKHQS------PALKPLQSVNGLEMFGFFSPSIVQAIEALDPYHQCLEY 489
            EMV+ +L +EI +H S      P+L+ LQ VNGLEMFGF SP I+Q IEALDP HQCLEY
Sbjct: 947  EMVLQKLQQEIIRHSSLGKQLLPSLECLQGVNGLEMFGFLSPPIIQVIEALDPNHQCLEY 1006

Query: 488  WNQHLSLRGDNTNTAANSDSACVTTRDGDRMPIQPTWALERTSQDAFTQVLMKKDLERS- 312
            WNQ   ++ +N N  + S+S         + P   + +   T    F   L K+D + S 
Sbjct: 1007 WNQKSRVKMENVNDMSASNSR--------KYPFGLSCSPGETKAKLFGFDLTKQDPDNSS 1058

Query: 311  --RRGVQLGDNVQNVLGGLFKKANLQELKAMQSILCSEYRSNDWTLAYTTLTEEIQK 147
              R    +G++++  L G FKKAN +EL  M  + CSEY S +W +A+TTLTEEI+K
Sbjct: 1059 IGRGDHSVGEDIKTTLQGFFKKANREELIMMYKVFCSEYTSAEWGVAFTTLTEEIRK 1115


>emb|CBI39010.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  120 bits (302), Expect = 2e-25
 Identities = 72/174 (41%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
 Frame = -3

Query: 650  EMVVDRLNKEISKHQS------PALKPLQSVNGLEMFGFFSPSIVQAIEALDPYHQCLEY 489
            EMV+ +L +EI +H S      P+L+ LQ VNGLEMFGF SP I+Q IEALDP HQCLEY
Sbjct: 809  EMVLQKLQQEIIRHSSLGKQLLPSLECLQGVNGLEMFGFLSPPIIQVIEALDPNHQCLEY 868

Query: 488  WNQHLSLRGDNTNTAANSDSACVTTRDGDRMPIQPTWALERTSQDAFTQVLMKKDLERSR 309
            WNQ          + A      +T +D D   I                          R
Sbjct: 869  WNQ---------KSRAKLFGFDLTKQDPDNSSI-------------------------GR 894

Query: 308  RGVQLGDNVQNVLGGLFKKANLQELKAMQSILCSEYRSNDWTLAYTTLTEEIQK 147
                +G++++  L G FKKAN +EL  M  + CSEY S +W +A+TTLTEEI+K
Sbjct: 895  GDHSVGEDIKTTLQGFFKKANREELIMMYKVFCSEYTSAEWGVAFTTLTEEIRK 948


>ref|XP_002529883.1| transcription factor, putative [Ricinus communis]
            gi|223530610|gb|EEF32486.1| transcription factor,
            putative [Ricinus communis]
          Length = 935

 Score =  101 bits (252), Expect = 1e-19
 Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 8/176 (4%)
 Frame = -3

Query: 650  EMVVDRLNKEISKHQS------PALKPLQSVNGLEMFGFFSPSIVQAIEALDPYHQCLEY 489
            EMV+ RLN+EI +  +      P + PLQS+NGL+MFGF +  I+QAIEALD  HQ ++Y
Sbjct: 772  EMVLQRLNEEIMRRNTLGERGLPPVLPLQSINGLQMFGFSTSPILQAIEALDSNHQSVDY 831

Query: 488  WNQHLSLRGDNTNTAANSDSACVTTRDGDRMPIQPTWALERTSQDAFTQVLMKK--DLER 315
            W   L     N +T +    + +        P+ P        +D     +M K  D   
Sbjct: 832  WKNRLV----NLSTTSEVKQSLIGLGCN---PVDP--------EDKIGNNVMTKYPDNLN 876

Query: 314  SRRGVQLGDNVQNVLGGLFKKANLQELKAMQSILCSEYRSNDWTLAYTTLTEEIQK 147
            ++      + VQ+++ GLFKKAN +ELK M+ +LCS+ +S +   A TTL EEIQK
Sbjct: 877  AQGHSDEEEEVQHIVRGLFKKANSEELKIMRKVLCSDTQSAERRAALTTLMEEIQK 932


>ref|XP_003532801.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 923

 Score =  100 bits (249), Expect = 2e-19
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
 Frame = -3

Query: 650  EMVVDRLNKEISKHQS------PALKPLQSVNGLEMFGFFSPSIVQAIEALDPYHQCLEY 489
            E V+DRLN EI + +S      P L+ LQS+NG +MFGF SPSI+QA+EA DP HQC+EY
Sbjct: 758  ETVLDRLNHEIKRRRSRGEIELPPLELLQSINGHKMFGFLSPSIIQAVEAADPKHQCVEY 817

Query: 488  WNQHLSLRGDNTNTAANSDSACVTTRDGDRMPIQPTWALERTSQDAFTQVLMKKDLERSR 309
            WN H  +  +++ +A +    C  +            +L       F   L+K++ +   
Sbjct: 818  WN-HKEVVSESSGSAIDD---CKFSHGSSN-------SLGDVKTKLFGAGLIKQEQDSII 866

Query: 308  RGVQLGDNVQNVLGGLFKKANLQELKAMQSILCSEYRSNDWTLAYTTLTEEIQK 147
                  + ++ VL G  KKA+  EL AM  +  S+     W  A+ +L EEIQK
Sbjct: 867  GNCDSFEEMKLVLQGFLKKASPNELSAMHKLFSSDALFTQWRTAFVSLIEEIQK 920


>ref|XP_004135564.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Cucumis
            sativus] gi|449508625|ref|XP_004163366.1| PREDICTED:
            probable lysine-specific demethylase JMJ14-like [Cucumis
            sativus]
          Length = 1069

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 63/175 (36%), Positives = 94/175 (53%), Gaps = 8/175 (4%)
 Frame = -3

Query: 650  EMVVDRLNKEISKH--QSPALKP---LQSVNGLEMFGFFSPSIVQAIEALDPYHQCLEYW 486
            +MVV R+N+EI +H  +S    P   L+ V+GLEMFGF SP ++QAIEALDP HQC+EYW
Sbjct: 899  DMVVQRINREIERHNLRSGGRLPGQLLKEVDGLEMFGFLSPHVIQAIEALDPTHQCMEYW 958

Query: 485  N---QHLSLRGDNTNTAANSDSACVTTRDGDRMPIQPTWALERTSQDAFTQVLMKKDLER 315
            N   Q         NT   S +  +    G+      T+ + R   +  T  +    +ER
Sbjct: 959  NHRKQQAIPANSGDNTFCESSALGLNFCWGETS--ATTFDINREEDETVTPTI---GMER 1013

Query: 314  SRRGVQLGDNVQNVLGGLFKKANLQELKAMQSILCSEYRSNDWTLAYTTLTEEIQ 150
                 Q    V++VL GL  KAN +EL  +Q+I C++ ++ +    + +L +E Q
Sbjct: 1014 HH---QNEVQVRSVLKGLLNKANPEELSVLQTIFCTDSQTTELRAEFASLIKEKQ 1065


Top