BLASTX nr result

ID: Coptis24_contig00039201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039201
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282137.2| PREDICTED: ABC transporter B family member 1...   117   1e-24
emb|CAN81180.1| hypothetical protein VITISV_012787 [Vitis vinifera]   117   1e-24
ref|XP_002319279.1| multidrug/pheromone exporter, MDR family, AB...   114   8e-24
ref|XP_003541009.1| PREDICTED: putative multidrug resistance pro...   112   3e-23
ref|XP_003601883.1| ABC transporter B family member [Medicago tr...   111   5e-23

>ref|XP_002282137.2| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1245

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/79 (77%), Positives = 68/79 (86%)
 Frame = -1

Query: 239  RSLIGDRMSLLVQITVGASLAFVLGLIVTWRLASVMIAMQPFVIGCFYSRSVFMKSMSGK 60
            RSLIGDR+SLLVQ+   ASLAF++GLIVTWRLA VMIAMQP +IG FYS+SV MKSMS K
Sbjct: 789  RSLIGDRISLLVQVFFSASLAFMVGLIVTWRLAIVMIAMQPLLIGSFYSKSVLMKSMSEK 848

Query: 59   ARTAQSEGSQLASEAVVNH 3
            A  AQ+EGSQLASEA VNH
Sbjct: 849  ALKAQNEGSQLASEAAVNH 867


>emb|CAN81180.1| hypothetical protein VITISV_012787 [Vitis vinifera]
          Length = 1245

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/79 (77%), Positives = 68/79 (86%)
 Frame = -1

Query: 239  RSLIGDRMSLLVQITVGASLAFVLGLIVTWRLASVMIAMQPFVIGCFYSRSVFMKSMSGK 60
            RSLIGDR+SLLVQ+   ASLAF++GLIVTWRLA VMIAMQP +IG FYS+SV MKSMS K
Sbjct: 789  RSLIGDRISLLVQVFFSASLAFMVGLIVTWRLAIVMIAMQPLLIGSFYSKSVLMKSMSEK 848

Query: 59   ARTAQSEGSQLASEAVVNH 3
            A  AQ+EGSQLASEA VNH
Sbjct: 849  ALKAQNEGSQLASEAAVNH 867


>ref|XP_002319279.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222857655|gb|EEE95202.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1251

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/79 (70%), Positives = 67/79 (84%)
 Frame = -1

Query: 239  RSLIGDRMSLLVQITVGASLAFVLGLIVTWRLASVMIAMQPFVIGCFYSRSVFMKSMSGK 60
            RSL+GDRMSLLVQ   G+  A+ LGLI+TWRLA VMIA+QP V+G +YS+SV MKSM+GK
Sbjct: 794  RSLVGDRMSLLVQAFFGSLFAYTLGLILTWRLALVMIAVQPLVVGSYYSKSVLMKSMAGK 853

Query: 59   ARTAQSEGSQLASEAVVNH 3
            A+ AQ EGSQLASEAV+NH
Sbjct: 854  AQKAQKEGSQLASEAVINH 872


>ref|XP_003541009.1| PREDICTED: putative multidrug resistance protein-like [Glycine max]
          Length = 1243

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/79 (70%), Positives = 65/79 (82%)
 Frame = -1

Query: 239  RSLIGDRMSLLVQITVGASLAFVLGLIVTWRLASVMIAMQPFVIGCFYSRSVFMKSMSGK 60
            RSL+GDRMSLL Q   G+  A+ LGL++TWRL+ VMIA+QP VIG FYSRSV MKSM+ K
Sbjct: 788  RSLVGDRMSLLAQAIFGSIFAYTLGLVLTWRLSLVMIAVQPLVIGSFYSRSVLMKSMAEK 847

Query: 59   ARTAQSEGSQLASEAVVNH 3
            AR AQ EGSQLASEAV+NH
Sbjct: 848  ARKAQREGSQLASEAVINH 866


>ref|XP_003601883.1| ABC transporter B family member [Medicago truncatula]
            gi|355490931|gb|AES72134.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1233

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/79 (69%), Positives = 65/79 (82%)
 Frame = -1

Query: 239  RSLIGDRMSLLVQITVGASLAFVLGLIVTWRLASVMIAMQPFVIGCFYSRSVFMKSMSGK 60
            RSL+ +RMSLLVQ++V A LAFVLGLIVTWR+A VMIAMQP +I C YS++V MKSMSGK
Sbjct: 779  RSLVAERMSLLVQVSVTALLAFVLGLIVTWRVAIVMIAMQPLIISCLYSKTVLMKSMSGK 838

Query: 59   ARTAQSEGSQLASEAVVNH 3
            A+ AQ + SQLA EA  NH
Sbjct: 839  AKNAQRDASQLAMEATTNH 857


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