BLASTX nr result
ID: Coptis24_contig00039177
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039177 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003630870.1| AP-3 complex subunit delta-1 [Medicago trunc... 100 1e-19 ref|XP_002276686.1| PREDICTED: AP-3 complex subunit delta-like [... 95 7e-18 ref|XP_002318543.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 emb|CBI15478.3| unnamed protein product [Vitis vinifera] 90 2e-16 ref|XP_002524910.1| conserved hypothetical protein [Ricinus comm... 90 2e-16 >ref|XP_003630870.1| AP-3 complex subunit delta-1 [Medicago truncatula] gi|355524892|gb|AET05346.1| AP-3 complex subunit delta-1 [Medicago truncatula] Length = 968 Score = 100 bits (249), Expect = 1e-19 Identities = 53/91 (58%), Positives = 69/91 (75%) Frame = +1 Query: 1 APSTTSSIMESLFQRTLDDLIKTIRSQILSEPTXXXXXXXXXXXXXXXTDLQTKSTALEK 180 A S++SSIM++LFQRTLDDLIK++R Q+L+E + TD QTKSTAL+K Sbjct: 2 AGSSSSSIMDNLFQRTLDDLIKSMRLQLLTESSFISKSIEEIRREIKSTDPQTKSTALQK 61 Query: 181 LTYLNSLYFIDMSFASFHVVEVMSSPKFIHR 273 LTYL+S++ IDMS+ASFHVVEVMSS F+H+ Sbjct: 62 LTYLSSIHGIDMSWASFHVVEVMSSSLFLHK 92 >ref|XP_002276686.1| PREDICTED: AP-3 complex subunit delta-like [Vitis vinifera] Length = 914 Score = 94.7 bits (234), Expect = 7e-18 Identities = 49/86 (56%), Positives = 62/86 (72%) Frame = +1 Query: 16 SSIMESLFQRTLDDLIKTIRSQILSEPTXXXXXXXXXXXXXXXTDLQTKSTALEKLTYLN 195 SSIM+SLFQR+L+DLIK IR +L+EPT TDL TKS AL+KLTYL+ Sbjct: 3 SSIMDSLFQRSLEDLIKGIRLNLLTEPTFISKSTDDIRREIKSTDLHTKSVALQKLTYLS 62 Query: 196 SLYFIDMSFASFHVVEVMSSPKFIHR 273 +LY +DMS+A+FHVVE+MSS F H+ Sbjct: 63 ALYGLDMSWAAFHVVELMSSSAFAHK 88 >ref|XP_002318543.1| predicted protein [Populus trichocarpa] gi|222859216|gb|EEE96763.1| predicted protein [Populus trichocarpa] Length = 968 Score = 91.7 bits (226), Expect = 6e-17 Identities = 46/85 (54%), Positives = 60/85 (70%) Frame = +1 Query: 19 SIMESLFQRTLDDLIKTIRSQILSEPTXXXXXXXXXXXXXXXTDLQTKSTALEKLTYLNS 198 S+M++LFQR+LDD+IK +R Q +E T TDLQTKSTAL+KLTYLNS Sbjct: 5 SLMDTLFQRSLDDIIKGLRHQQSTESTFISKVIEEIRREIKTTDLQTKSTALQKLTYLNS 64 Query: 199 LYFIDMSFASFHVVEVMSSPKFIHR 273 ++ IDMS+ASFH +E +SSP F H+ Sbjct: 65 IHSIDMSWASFHAIECISSPTFAHK 89 >emb|CBI15478.3| unnamed protein product [Vitis vinifera] Length = 868 Score = 90.1 bits (222), Expect = 2e-16 Identities = 46/83 (55%), Positives = 59/83 (71%) Frame = +1 Query: 25 MESLFQRTLDDLIKTIRSQILSEPTXXXXXXXXXXXXXXXTDLQTKSTALEKLTYLNSLY 204 M+SLFQR+L+DLIK IR +L+EPT TDL TKS AL+KLTYL++LY Sbjct: 1 MDSLFQRSLEDLIKGIRLNLLTEPTFISKSTDDIRREIKSTDLHTKSVALQKLTYLSALY 60 Query: 205 FIDMSFASFHVVEVMSSPKFIHR 273 +DMS+A+FHVVE+MSS F H+ Sbjct: 61 GLDMSWAAFHVVELMSSSAFAHK 83 >ref|XP_002524910.1| conserved hypothetical protein [Ricinus communis] gi|223535873|gb|EEF37534.1| conserved hypothetical protein [Ricinus communis] Length = 848 Score = 89.7 bits (221), Expect = 2e-16 Identities = 45/87 (51%), Positives = 59/87 (67%) Frame = +1 Query: 13 TSSIMESLFQRTLDDLIKTIRSQILSEPTXXXXXXXXXXXXXXXTDLQTKSTALEKLTYL 192 ++S++++LFQRTLDD+IK +R Q E TDL TKS AL+KLTYL Sbjct: 3 STSLIDTLFQRTLDDIIKGLRHQQTGESAFISKIVEEIRREIKSTDLHTKSVALQKLTYL 62 Query: 193 NSLYFIDMSFASFHVVEVMSSPKFIHR 273 NSL+FIDMS+A+FH VE +SSP F H+ Sbjct: 63 NSLHFIDMSWAAFHAVECISSPNFSHK 89