BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039162
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337566.1| light harvesting protein 3 [Populus trichoca...    73   3e-11
ref|XP_002275690.1| PREDICTED: uncharacterized protein LOC100259...    68   7e-10
ref|XP_002511036.1| transcription factor, putative [Ricinus comm...    67   2e-09
emb|CBI26582.3| unnamed protein product [Vitis vinifera]               61   8e-08

>ref|XP_002337566.1| light harvesting protein 3 [Populus trichocarpa]
           gi|222839577|gb|EEE77914.1| light harvesting protein 3
           [Populus trichocarpa]
          Length = 249

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = -1

Query: 269 KKHNSILRPTCSLGAMHASNVATIDVESKKMVNMTETHERPVVLKTEPVAIKSESMPGTE 90
           KK     R   SLG+  A+   T++VE ++ V M+E  E+P +          +   G E
Sbjct: 21  KKQRPQARTARSLGSKQATRAVTLNVEGQRGVGMSEQQEKPALATGGSNKANDKLENGLE 80

Query: 89  TELSDPMFSDERWKNGTWDLNMFVKNGK 6
           T+ S P F DERWK GTWDLNMFV++GK
Sbjct: 81  TKHSVPKFIDERWKKGTWDLNMFVRDGK 108


>ref|XP_002275690.1| PREDICTED: uncharacterized protein LOC100259582 [Vitis vinifera]
          Length = 259

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
 Frame = -1

Query: 269 KKHNSILRPTCSLGAMHASNVATIDVESKKMVNMTETHER------PVVLKTEPVAIKSE 108
           KK     RP  S+G    ++V  ++ E  K +N+ E   +           +       E
Sbjct: 22  KKQQPQARPARSMGTKQETHVVALETEGPKGLNIAEQEAKFGFNAGSSTTTSRDAKDDDE 81

Query: 107 SMPGTETELSDPMFSDERWKNGTWDLNMFVKNGK 6
           +  G +TE S P FSDERWKNGTWDLNMFV++GK
Sbjct: 82  AGSGLDTEPSAPKFSDERWKNGTWDLNMFVRDGK 115


>ref|XP_002511036.1| transcription factor, putative [Ricinus communis]
           gi|223550151|gb|EEF51638.1| transcription factor,
           putative [Ricinus communis]
          Length = 240

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/86 (39%), Positives = 48/86 (55%)
 Frame = -1

Query: 269 KKHNSILRPTCSLGAMHASNVATIDVESKKMVNMTETHERPVVLKTEPVAIKSESMPGTE 90
           KK     RP   LG    ++V T++VE +K ++++E  E+P +          +S  G E
Sbjct: 21  KKQQPQARPARPLGTKQVTHVVTLNVEGQKGLSISEQQEKPPLDANGSKRADDKSDHGPE 80

Query: 89  TELSDPMFSDERWKNGTWDLNMFVKN 12
            E S P F DERW+ G WDLNMFVK+
Sbjct: 81  AESSTPTFIDERWQMGNWDLNMFVKD 106


>emb|CBI26582.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
 Frame = -1

Query: 233 LGAMHASNVATIDVESKKMVNMTETHER------PVVLKTEPVAIKSESMPGTETELSDP 72
           +G    ++V  ++ E  K +N+ E   +           +       E+  G +TE S P
Sbjct: 1   MGTKQETHVVALETEGPKGLNIAEQEAKFGFNAGSSTTTSRDAKDDDEAGSGLDTEPSAP 60

Query: 71  MFSDERWKNGTWDLNMFVKNGK 6
            FSDERWKNGTWDLNMFV++GK
Sbjct: 61  KFSDERWKNGTWDLNMFVRDGK 82