BLASTX nr result
ID: Coptis24_contig00039150
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039150 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN75386.1| hypothetical protein VITISV_016218 [Vitis vinifera] 79 3e-13 ref|XP_002529710.1| Cyclin-L2, putative [Ricinus communis] gi|22... 79 5e-13 ref|NP_001242524.1| uncharacterized protein LOC100820383 [Glycin... 78 8e-13 ref|XP_002312033.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus... 75 4e-12 >emb|CAN75386.1| hypothetical protein VITISV_016218 [Vitis vinifera] Length = 299 Score = 79.3 bits (194), Expect = 3e-13 Identities = 55/118 (46%), Positives = 66/118 (55%), Gaps = 26/118 (22%) Frame = +2 Query: 92 TDEPLKNLPSGQDEID--TKTTLMLYG-DLI*ESGILLELPQAVTAMGQS-----GCK-- 241 TDE LKN PS +D ID T+TTL +YG DLI ESGILL LPQAV A GQ CK Sbjct: 12 TDEQLKNSPSRKDGIDEATETTLRIYGCDLIQESGILLRLPQAVMATGQVLFHRFYCKKS 71 Query: 242 ----------------LCRAEEIPRKVWHIILVFNRMEC*R*SLPIEHFDNSSKELFE 367 + EE PRK +++VF+RMEC R +LP+ H D SK+ E Sbjct: 72 FARFNVKRVAASCVWLASKLEESPRKARQVLIVFHRMECRRENLPVVHLDPFSKKYAE 129 >ref|XP_002529710.1| Cyclin-L2, putative [Ricinus communis] gi|223530812|gb|EEF32676.1| Cyclin-L2, putative [Ricinus communis] Length = 446 Score = 78.6 bits (192), Expect = 5e-13 Identities = 56/118 (47%), Positives = 68/118 (57%), Gaps = 26/118 (22%) Frame = +2 Query: 92 TDEPLKNLPSGQDEID--TKTTLMLYG-DLI*ESGILLELPQAVTAMGQS-----GCK-- 241 TDE L+N PS +D ID T+TTL +YG DLI ESGILL+LPQAV A GQ CK Sbjct: 12 TDEQLQNSPSKKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKKS 71 Query: 242 ----------------LCRAEEIPRKVWHIILVFNRMEC*R*SLPIEHFDNSSKELFE 367 + EE PRK +I+VF+RMEC R +LPIE D +SK+ E Sbjct: 72 FGRFNVKKVAASCVWLASKLEENPRKSRQVIIVFHRMECRRENLPIEFLDLNSKKFAE 129 >ref|NP_001242524.1| uncharacterized protein LOC100820383 [Glycine max] gi|255640064|gb|ACU20323.1| unknown [Glycine max] Length = 445 Score = 77.8 bits (190), Expect = 8e-13 Identities = 55/115 (47%), Positives = 64/115 (55%), Gaps = 26/115 (22%) Frame = +2 Query: 92 TDEPLKNLPSGQDEID--TKTTLMLYG-DLI*ESGILLELPQAVTAMGQS-----GCK-- 241 TDE L N PS +D ID T+TTL +YG DLI ESGILL LPQAV A GQ CK Sbjct: 12 TDEQLANSPSRKDGIDEATETTLRIYGCDLIQESGILLRLPQAVMATGQVLFHRFYCKKS 71 Query: 242 ----------------LCRAEEIPRKVWHIILVFNRMEC*R*SLPIEHFDNSSKE 358 + EE PRK +I+VF+RMEC R S P+EH D SK+ Sbjct: 72 FARFNVKKVAASCVWLASKLEENPRKARQVIIVFHRMECRRESFPMEHLDLYSKK 126 >ref|XP_002312033.1| predicted protein [Populus trichocarpa] gi|222851853|gb|EEE89400.1| predicted protein [Populus trichocarpa] Length = 421 Score = 77.0 bits (188), Expect = 1e-12 Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 26/118 (22%) Frame = +2 Query: 92 TDEPLKNLPSGQDEID--TKTTLMLYG-DLI*ESGILLELPQAVTAMGQS-----GCK-- 241 TD+ L+N PS +D ID T+TTL +YG DLI ESGILL+LPQAV A GQ CK Sbjct: 12 TDDELQNSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKKS 71 Query: 242 ----------------LCRAEEIPRKVWHIILVFNRMEC*R*SLPIEHFDNSSKELFE 367 + EE PRK +I+VF+RMEC R +LP+E D +SK+ E Sbjct: 72 FARFNVKKVAASCVWLASKLEESPRKSRQVIIVFHRMECRRENLPLEFLDLNSKKFAE 129 >ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus] gi|449485709|ref|XP_004157252.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus] Length = 443 Score = 75.5 bits (184), Expect = 4e-12 Identities = 54/115 (46%), Positives = 65/115 (56%), Gaps = 26/115 (22%) Frame = +2 Query: 92 TDEPLKNLPSGQDEID--TKTTLMLYG-DLI*ESGILLELPQAVTAMGQ----------- 229 TDE LKN PS +D ID T+TTL +YG DLI E+GILL+LPQAV A GQ Sbjct: 12 TDEQLKNSPSRKDGIDETTETTLRIYGCDLIQEAGILLKLPQAVMATGQVLFHRFYCKKS 71 Query: 230 ----------SGCK--LCRAEEIPRKVWHIILVFNRMEC*R*SLPIEHFDNSSKE 358 S C + EE PRK +I+VF+RMEC R +L IE D S K+ Sbjct: 72 FARFNVKKVASSCVWLASKLEENPRKARQVIIVFHRMECRRENLSIEFLDPSLKK 126