BLASTX nr result

ID: Coptis24_contig00039146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039146
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523753.1| transferase, transferring glycosyl groups, p...    57   2e-06
ref|XP_002330776.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_003588614.1| Exostosin-1a [Medicago truncatula] gi|355477...    55   6e-06

>ref|XP_002523753.1| transferase, transferring glycosyl groups, putative [Ricinus
           communis] gi|223537057|gb|EEF38693.1| transferase,
           transferring glycosyl groups, putative [Ricinus
           communis]
          Length = 349

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   LRYSYGKVVNSVGEQGLCDKGGKLVLCD 86
           LRYSYGKV+NSVGEQGLC KGGKL+ CD
Sbjct: 319 LRYSYGKVINSVGEQGLCMKGGKLIFCD 346


>ref|XP_002330776.1| predicted protein [Populus trichocarpa] gi|222872578|gb|EEF09709.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +3

Query: 3   LRYSYGKVVNSVGEQGLCDKGGKLVLCDE 89
           LRYSYGKVVNSVGEQG C KGGKLV CD+
Sbjct: 303 LRYSYGKVVNSVGEQGRCLKGGKLVFCDQ 331


>ref|XP_003588614.1| Exostosin-1a [Medicago truncatula] gi|355477662|gb|AES58865.1|
           Exostosin-1a [Medicago truncatula]
          Length = 292

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 3   LRYSYGKVVNSVGEQGLCDKGGKLVLCDE 89
           LRYSYGKVV+S+GEQGLC KGG+LV CD+
Sbjct: 264 LRYSYGKVVDSIGEQGLCRKGGRLVFCDQ 292


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