BLASTX nr result
ID: Coptis24_contig00039142
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039142 (263 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu... 91 1e-16 ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu... 91 1e-16 ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm... 88 8e-16 ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi... 87 1e-15 emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera] 87 1e-15 >ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus] Length = 1362 Score = 90.9 bits (224), Expect = 1e-16 Identities = 41/86 (47%), Positives = 59/86 (68%) Frame = +3 Query: 6 VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185 ++ GLKKKL+ IGK ++CLM++T+E P + IKGKG+ G+YTGI+ Sbjct: 286 INFWGLKKKLVSIGKAESCLMYVTSEKSSLHLSRLSRTRLPCKKSVIKGKGECGSYTGII 345 Query: 186 TGVYMQGMVIELDEKVWLLLSDRLLA 263 GVYMQGM++ELD +VW+LL+D L+ Sbjct: 346 KGVYMQGMLVELDNEVWVLLTDHFLS 371 >ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus] Length = 1383 Score = 90.9 bits (224), Expect = 1e-16 Identities = 41/86 (47%), Positives = 59/86 (68%) Frame = +3 Query: 6 VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185 ++ GLKKKL+ IGK ++CLM++T+E P + IKGKG+ G+YTGI+ Sbjct: 286 INFWGLKKKLVSIGKAESCLMYVTSEKSSLHLSRLSRTRLPCKKSVIKGKGECGSYTGII 345 Query: 186 TGVYMQGMVIELDEKVWLLLSDRLLA 263 GVYMQGM++ELD +VW+LL+D L+ Sbjct: 346 KGVYMQGMLVELDNEVWVLLTDHFLS 371 >ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis] gi|223550977|gb|EEF52463.1| conserved hypothetical protein [Ricinus communis] Length = 1159 Score = 87.8 bits (216), Expect = 8e-16 Identities = 43/86 (50%), Positives = 60/86 (69%) Frame = +3 Query: 6 VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185 V+++GLKKKL++IGK ++ LMF+ TE P R+ + GKG+ G Y G V Sbjct: 261 VTLSGLKKKLVFIGKEESQLMFVITENSVIHLPRVAKNWSPFLRNVVLGKGECGDYKGAV 320 Query: 186 TGVYMQGMVIELDEKVWLLLSDRLLA 263 + VYMQGMV+ELD++VWLLL+D+LLA Sbjct: 321 SVVYMQGMVVELDKEVWLLLTDQLLA 346 >ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera] Length = 1215 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/85 (48%), Positives = 57/85 (67%) Frame = +3 Query: 6 VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185 + ++ LKKKL++IGK ++ LM++TT P IKG G+ G Y+GI+ Sbjct: 299 ICISHLKKKLVFIGKEESQLMYVTTGKTVLRVLSMANQELPHKEAVIKGMGECGLYSGII 358 Query: 186 TGVYMQGMVIELDEKVWLLLSDRLL 260 TG+YMQGMVI LDE+VWLL++DRLL Sbjct: 359 TGIYMQGMVINLDERVWLLITDRLL 383 >emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera] Length = 1618 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/85 (48%), Positives = 57/85 (67%) Frame = +3 Query: 6 VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185 + ++ LKKKL++IGK ++ LM++TT P IKG G+ G Y+GI+ Sbjct: 441 ICISHLKKKLVFIGKEESQLMYVTTGKTVLRVLSMANQELPHKEAVIKGMGECGLYSGII 500 Query: 186 TGVYMQGMVIELDEKVWLLLSDRLL 260 TG+YMQGMVI LDE+VWLL++DRLL Sbjct: 501 TGIYMQGMVINLDERVWLLITDRLL 525