BLASTX nr result

ID: Coptis24_contig00039142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039142
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    91   1e-16
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...    91   1e-16
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...    87   1e-15
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    87   1e-15

>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +3

Query: 6   VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185
           ++  GLKKKL+ IGK ++CLM++T+E              P  +  IKGKG+ G+YTGI+
Sbjct: 286 INFWGLKKKLVSIGKAESCLMYVTSEKSSLHLSRLSRTRLPCKKSVIKGKGECGSYTGII 345

Query: 186 TGVYMQGMVIELDEKVWLLLSDRLLA 263
            GVYMQGM++ELD +VW+LL+D  L+
Sbjct: 346 KGVYMQGMLVELDNEVWVLLTDHFLS 371


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +3

Query: 6   VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185
           ++  GLKKKL+ IGK ++CLM++T+E              P  +  IKGKG+ G+YTGI+
Sbjct: 286 INFWGLKKKLVSIGKAESCLMYVTSEKSSLHLSRLSRTRLPCKKSVIKGKGECGSYTGII 345

Query: 186 TGVYMQGMVIELDEKVWLLLSDRLLA 263
            GVYMQGM++ELD +VW+LL+D  L+
Sbjct: 346 KGVYMQGMLVELDNEVWVLLTDHFLS 371


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
           gi|223550977|gb|EEF52463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1159

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/86 (50%), Positives = 60/86 (69%)
 Frame = +3

Query: 6   VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185
           V+++GLKKKL++IGK ++ LMF+ TE              P  R+ + GKG+ G Y G V
Sbjct: 261 VTLSGLKKKLVFIGKEESQLMFVITENSVIHLPRVAKNWSPFLRNVVLGKGECGDYKGAV 320

Query: 186 TGVYMQGMVIELDEKVWLLLSDRLLA 263
           + VYMQGMV+ELD++VWLLL+D+LLA
Sbjct: 321 SVVYMQGMVVELDKEVWLLLTDQLLA 346


>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/85 (48%), Positives = 57/85 (67%)
 Frame = +3

Query: 6   VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185
           + ++ LKKKL++IGK ++ LM++TT               P     IKG G+ G Y+GI+
Sbjct: 299 ICISHLKKKLVFIGKEESQLMYVTTGKTVLRVLSMANQELPHKEAVIKGMGECGLYSGII 358

Query: 186 TGVYMQGMVIELDEKVWLLLSDRLL 260
           TG+YMQGMVI LDE+VWLL++DRLL
Sbjct: 359 TGIYMQGMVINLDERVWLLITDRLL 383


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/85 (48%), Positives = 57/85 (67%)
 Frame = +3

Query: 6   VSVTGLKKKLIYIGKNDTCLMFITTEXXXXXXXXXXXXXXPIHRDEIKGKGDFGAYTGIV 185
           + ++ LKKKL++IGK ++ LM++TT               P     IKG G+ G Y+GI+
Sbjct: 441 ICISHLKKKLVFIGKEESQLMYVTTGKTVLRVLSMANQELPHKEAVIKGMGECGLYSGII 500

Query: 186 TGVYMQGMVIELDEKVWLLLSDRLL 260
           TG+YMQGMVI LDE+VWLL++DRLL
Sbjct: 501 TGIYMQGMVINLDERVWLLITDRLL 525


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