BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039107
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]    97   1e-18
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    97   1e-18
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                        94   1e-17
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]    92   4e-17
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...    90   2e-16

>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/108 (52%), Positives = 69/108 (63%), Gaps = 11/108 (10%)
 Frame = -1

Query: 304 VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*N---------LEALQFLDK 152
           +DYEE FSPV ML KSIR+LLSIAA++D EIWQMDVKTAF N          +   F+  
Sbjct: 188 IDYEETFSPVAML-KSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQXEGFIXN 246

Query: 151 SIKYAS*K--SPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14
             ++   K       LK ASRSWN  FDQTIK+FGFDQC  + CV ++
Sbjct: 247 GQEHLLCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCVYKK 294


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/108 (52%), Positives = 65/108 (60%), Gaps = 11/108 (10%)
 Frame = -1

Query: 304  VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*N-----------LEALQFL 158
            +DYEE FSPV ML KSIR+LLSIAA++D EIWQMDVKTAF N           LE     
Sbjct: 866  IDYEETFSPVAML-KSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQLEGFITN 924

Query: 157  DKSIKYAS*KSPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14
             +             LK ASRSWN  FDQTIK+FGFDQC    CV ++
Sbjct: 925  GQEHLLCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDVSCVYKK 972


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 56/108 (51%), Positives = 68/108 (62%), Gaps = 11/108 (10%)
 Frame = -1

Query: 304  VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF--*NLEALQFL--------- 158
            VDYEE FSPV ML KSIR+LLSIA  Y+ EIWQMDVKTAF   NLE   ++         
Sbjct: 883  VDYEETFSPVAML-KSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQ 941

Query: 157  DKSIKYAS*KSPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14
            D+  K    +     LK ASRSWN+ FD  IKS+GF+Q   +PCV ++
Sbjct: 942  DQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKK 989


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/108 (50%), Positives = 69/108 (63%), Gaps = 11/108 (10%)
 Frame = -1

Query: 304 VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*N--LEALQFL--------- 158
           VDYE+ FSPV ML KSIR+LLSI A+YD EIWQMDVKT F N  LE   ++         
Sbjct: 223 VDYEDTFSPVXML-KSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYMVQPEGFVVK 281

Query: 157 DKSIKYAS*KSPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14
           D+  K    +     LK ASRSWN+ F++ IKS+GF+Q   +PCV ++
Sbjct: 282 DQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQ 329


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/97 (52%), Positives = 68/97 (70%)
 Frame = -1

Query: 304  VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*NLEALQFLDKSIKYAS*KS 125
            VDY+E FSPV ML KSI+++L+IAA++D EIWQMDVKTAF N    +  DKSI       
Sbjct: 1359 VDYDETFSPVAML-KSIQIVLAIAAYFDYEIWQMDVKTAFLNGNLDE--DKSI------- 1408

Query: 124  PFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14
                LK ASRSWN+ FD+ +K+ GF + E++PCV ++
Sbjct: 1409 --YGLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKK 1443