BLASTX nr result
ID: Coptis24_contig00039107
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039107 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 97 1e-18 emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 97 1e-18 gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 94 1e-17 emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 92 4e-17 gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 90 2e-16 >emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] Length = 633 Score = 97.4 bits (241), Expect = 1e-18 Identities = 57/108 (52%), Positives = 69/108 (63%), Gaps = 11/108 (10%) Frame = -1 Query: 304 VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*N---------LEALQFLDK 152 +DYEE FSPV ML KSIR+LLSIAA++D EIWQMDVKTAF N + F+ Sbjct: 188 IDYEETFSPVAML-KSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQXEGFIXN 246 Query: 151 SIKYAS*K--SPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14 ++ K LK ASRSWN FDQTIK+FGFDQC + CV ++ Sbjct: 247 GQEHLLCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCVYKK 294 >emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] Length = 1285 Score = 97.4 bits (241), Expect = 1e-18 Identities = 57/108 (52%), Positives = 65/108 (60%), Gaps = 11/108 (10%) Frame = -1 Query: 304 VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*N-----------LEALQFL 158 +DYEE FSPV ML KSIR+LLSIAA++D EIWQMDVKTAF N LE Sbjct: 866 IDYEETFSPVAML-KSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQLEGFITN 924 Query: 157 DKSIKYAS*KSPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14 + LK ASRSWN FDQTIK+FGFDQC CV ++ Sbjct: 925 GQEHLLCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDVSCVYKK 972 >gb|ADJ18449.1| gag/pol protein [Bryonia dioica] Length = 1292 Score = 93.6 bits (231), Expect = 1e-17 Identities = 56/108 (51%), Positives = 68/108 (62%), Gaps = 11/108 (10%) Frame = -1 Query: 304 VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF--*NLEALQFL--------- 158 VDYEE FSPV ML KSIR+LLSIA Y+ EIWQMDVKTAF NLE ++ Sbjct: 883 VDYEETFSPVAML-KSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQ 941 Query: 157 DKSIKYAS*KSPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14 D+ K + LK ASRSWN+ FD IKS+GF+Q +PCV ++ Sbjct: 942 DQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKK 989 >emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] Length = 668 Score = 92.0 bits (227), Expect = 4e-17 Identities = 54/108 (50%), Positives = 69/108 (63%), Gaps = 11/108 (10%) Frame = -1 Query: 304 VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*N--LEALQFL--------- 158 VDYE+ FSPV ML KSIR+LLSI A+YD EIWQMDVKT F N LE ++ Sbjct: 223 VDYEDTFSPVXML-KSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYMVQPEGFVVK 281 Query: 157 DKSIKYAS*KSPFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14 D+ K + LK ASRSWN+ F++ IKS+GF+Q +PCV ++ Sbjct: 282 DQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQ 329 >gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1745 Score = 90.1 bits (222), Expect = 2e-16 Identities = 51/97 (52%), Positives = 68/97 (70%) Frame = -1 Query: 304 VDYEEIFSPVVMLNKSIRVLLSIAAHYDNEIWQMDVKTAF*NLEALQFLDKSIKYAS*KS 125 VDY+E FSPV ML KSI+++L+IAA++D EIWQMDVKTAF N + DKSI Sbjct: 1359 VDYDETFSPVAML-KSIQIVLAIAAYFDYEIWQMDVKTAFLNGNLDE--DKSI------- 1408 Query: 124 PFMDLK*ASRSWNVYFDQTIKSFGFDQCEKKPCVLQE 14 LK ASRSWN+ FD+ +K+ GF + E++PCV ++ Sbjct: 1409 --YGLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKK 1443