BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039102
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subc...   180   1e-43
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                180   1e-43
emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]           180   1e-43
emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group]           179   2e-43
gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subc...   179   2e-43

>gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1778

 Score =  180 bits (456), Expect = 1e-43
 Identities = 81/122 (66%), Positives = 99/122 (81%)
 Frame = -3

Query: 366  EEHKMHLKTVMQTFREHKLYAKFSKCHFWEEEIRFLGHVVSSEGIAVDPEKVAAVKEWKQ 187
            EEH+ HL+  ++  REH+LYAKFSKC FW  E++FLGHV+SS G+AVDP  V +V  WKQ
Sbjct: 1005 EEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQ 1064

Query: 186  PTTVTEIRSFLGLAGYYRRFIEKFSLIATPLTKLTRKDVKFMWTNDCEKAFLELKQRLTT 7
            P TV+EIRSFLGLAGYYRRFIE FS IA P+T+L +KDVK+ WT DCE++F ELK+RL T
Sbjct: 1065 PKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCEQSFQELKKRLVT 1124

Query: 6    AP 1
            AP
Sbjct: 1125 AP 1126


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score =  180 bits (456), Expect = 1e-43
 Identities = 80/122 (65%), Positives = 99/122 (81%)
 Frame = -3

Query: 366  EEHKMHLKTVMQTFREHKLYAKFSKCHFWEEEIRFLGHVVSSEGIAVDPEKVAAVKEWKQ 187
            EEH+ HL+  ++  REH+LYAKFSKC FW  E++FLGHV+SS G+AVDP  V +V  WKQ
Sbjct: 708  EEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQ 767

Query: 186  PTTVTEIRSFLGLAGYYRRFIEKFSLIATPLTKLTRKDVKFMWTNDCEKAFLELKQRLTT 7
            P TV+E+RSFLGLAGYYRRFIE FS IA P+T+L +K+VKF WT DCE++F ELK+RL T
Sbjct: 768  PKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKFKWTEDCERSFQELKERLVT 827

Query: 6    AP 1
            AP
Sbjct: 828  AP 829


>emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
          Length = 1433

 Score =  180 bits (456), Expect = 1e-43
 Identities = 80/122 (65%), Positives = 99/122 (81%)
 Frame = -3

Query: 366  EEHKMHLKTVMQTFREHKLYAKFSKCHFWEEEIRFLGHVVSSEGIAVDPEKVAAVKEWKQ 187
            EEH+ HL+  ++  REH+LYAKFSKC FW  E++FLGHV+SS G+AVDP  V +V  WKQ
Sbjct: 708  EEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQ 767

Query: 186  PTTVTEIRSFLGLAGYYRRFIEKFSLIATPLTKLTRKDVKFMWTNDCEKAFLELKQRLTT 7
            P TV+E+RSFLGLAGYYRRFIE FS IA P+T+L +KDVK+ WT DCE++F ELK+RL T
Sbjct: 768  PKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCERSFQELKKRLVT 827

Query: 6    AP 1
            AP
Sbjct: 828  AP 829


>emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group]
          Length = 1443

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/122 (65%), Positives = 98/122 (80%)
 Frame = -3

Query: 366  EEHKMHLKTVMQTFREHKLYAKFSKCHFWEEEIRFLGHVVSSEGIAVDPEKVAAVKEWKQ 187
            EEH+ HL+  ++  REH+LYAKFSKC FW  E++FLGHV+SS G+AVDP  V +V  WKQ
Sbjct: 670  EEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQ 729

Query: 186  PTTVTEIRSFLGLAGYYRRFIEKFSLIATPLTKLTRKDVKFMWTNDCEKAFLELKQRLTT 7
            P TV+E+RSFLGLAGYYRRFIE FS IA P+T+L +KDVK+ WT DCE++F ELK RL T
Sbjct: 730  PKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCERSFQELKNRLVT 789

Query: 6    AP 1
            AP
Sbjct: 790  AP 791


>gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1068

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/122 (65%), Positives = 99/122 (81%)
 Frame = -3

Query: 366  EEHKMHLKTVMQTFREHKLYAKFSKCHFWEEEIRFLGHVVSSEGIAVDPEKVAAVKEWKQ 187
            EEHK HL+  ++  REH+LYAKFSKC FW  E++FLGHV+SS G+AVDP  V +V  WKQ
Sbjct: 934  EEHKEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQ 993

Query: 186  PTTVTEIRSFLGLAGYYRRFIEKFSLIATPLTKLTRKDVKFMWTNDCEKAFLELKQRLTT 7
            P TV+E+RSFLGLAGYYRRFIE FS IA P+T+L +K+VK+ WT DCE++F ELK+RL T
Sbjct: 994  PKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCEQSFQELKKRLVT 1053

Query: 6    AP 1
            AP
Sbjct: 1054 AP 1055