BLASTX nr result

ID: Coptis24_contig00039099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039099
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270718.2| PREDICTED: uncharacterized protein LOC100267...   101   7e-20
ref|XP_002302769.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
gb|AFK46451.1| unknown [Lotus japonicus]                               92   6e-17
ref|XP_002320294.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003553669.1| PREDICTED: uncharacterized protein LOC100820...    89   3e-16

>ref|XP_002270718.2| PREDICTED: uncharacterized protein LOC100267467 [Vitis vinifera]
          Length = 284

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/93 (59%), Positives = 64/93 (68%), Gaps = 4/93 (4%)
 Frame = -1

Query: 293 AQYLLSSYPS----QSDSXXXXXXLYTNPTLLHVLVSFVSITALLHGLTGRITLLKGSTS 126
           A YLLS   +    Q  S      LYTNPTLLH  VSF+S+  L+HGLTGR+ LL  +TS
Sbjct: 50  AHYLLSLGTNIAIPQPFSLVFSFFLYTNPTLLHAFVSFISLATLVHGLTGRMALLSEATS 109

Query: 125 PIVQPGIYTAWILLCTLQVCVGLGIEGTIAAGM 27
              QP +YTAWI LCTLQVCVGLGIE +IAAG+
Sbjct: 110 QSFQPRLYTAWIFLCTLQVCVGLGIEVSIAAGI 142


>ref|XP_002302769.1| predicted protein [Populus trichocarpa] gi|222844495|gb|EEE82042.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/67 (65%), Positives = 54/67 (80%)
 Frame = -1

Query: 224 NPTLLHVLVSFVSITALLHGLTGRITLLKGSTSPIVQPGIYTAWILLCTLQVCVGLGIEG 45
           NP++L  LVS VSI  L+HGL GR TLL  S   I +PG+YTAWI+LCTLQ+CVGLGIEG
Sbjct: 72  NPSILCFLVSIVSIATLIHGLAGRTTLLSESPGVIYRPGLYTAWIVLCTLQICVGLGIEG 131

Query: 44  TIAAGMW 24
           +IAAG++
Sbjct: 132 SIAAGIF 138


>gb|AFK46451.1| unknown [Lotus japonicus]
          Length = 307

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -1

Query: 224 NPTLLHVLVSFVSITALLHGLTGRITLLK-GSTSPIVQPGIYTAWILLCTLQVCVGLGIE 48
           NP +L+VLVS VSI  L++GL G+ITLL   STSP++QP +Y AWILLC  Q CVGLGIE
Sbjct: 82  NPCILYVLVSIVSIATLINGLMGKITLLNDSSTSPVLQPSLYIAWILLCAFQFCVGLGIE 141

Query: 47  GTIAAGMWTIDD 12
            +IAAG++  D+
Sbjct: 142 ASIAAGIFEFDN 153


>ref|XP_002320294.1| predicted protein [Populus trichocarpa] gi|222861067|gb|EEE98609.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = -1

Query: 224 NPTLLHVLVSFVSITALLHGLTGRITLLKGSTSPIVQPGIYTAWILLCTLQVCVGLGIEG 45
           N  +L+ LVS VS+  L+HGLTG+ITLL  ST    +PG+YTAWI+LCTLQ+CVGLG++ 
Sbjct: 72  NTAVLYFLVSVVSVATLIHGLTGKITLLSESTGATYRPGLYTAWIMLCTLQICVGLGVQR 131

Query: 44  TIAAGMW 24
           +++AGM+
Sbjct: 132 SVSAGMF 138


>ref|XP_003553669.1| PREDICTED: uncharacterized protein LOC100820518 [Glycine max]
          Length = 292

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/77 (54%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
 Frame = -1

Query: 230 YTNPTLLHVLVSFVSITALLHGLTGRITLLK---GSTSPIVQPGIYTAWILLCTLQVCVG 60
           + NP +L+VLVS +S+ +L+HGLTG+I +L     S+S  +QP I TAWI+LCT QVCVG
Sbjct: 67  HINPLILYVLVSIISMASLIHGLTGKIIILSDSLSSSSTFLQPRILTAWIVLCTFQVCVG 126

Query: 59  LGIEGTIAAGMWTIDDD 9
           LGIEG+I AG++  +D+
Sbjct: 127 LGIEGSIEAGLYDSNDE 143


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