BLASTX nr result

ID: Coptis24_contig00039096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039096
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    90   2e-16
emb|CAN61222.1| hypothetical protein VITISV_034850 [Vitis vinifera]    87   2e-15
emb|CBI24911.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002278097.1| PREDICTED: uncharacterized protein LOC100260...    86   3e-15
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    82   6e-14

>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
 Frame = -1

Query: 354 ANLTGI-----SLSCFSKSIWIIDSGATNHVCSSLYLFSHYKACFTHSTLKLPDGTDHLI 190
           +N TGI     S S  + SIWI+DSGAT+HVC++  +F H    F+ +T+ LP GT   I
Sbjct: 354 SNFTGILSLSPSSSTLNPSIWILDSGATHHVCTNSSMF-HSIHSFSSNTVTLPTGTKIPI 412

Query: 189 IHVSSVILSPLLRLDNVLFVPTFHFNLLSISDLVKSHPISITFTNDSYIFQDQLSKKTIG 10
             + ++ LSP L L++VL++PTF FNL+SIS L +++  S  FT      QD    K IG
Sbjct: 413 TGIGTIHLSPHLVLEHVLYIPTFQFNLISISALTQTNCFSFDFTAHFCFIQDHSQGKLIG 472

Query: 9   L 7
           +
Sbjct: 473 M 473


>emb|CAN61222.1| hypothetical protein VITISV_034850 [Vitis vinifera]
          Length = 247

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/110 (43%), Positives = 66/110 (60%)
 Frame = -1

Query: 336 SLSCFSKSIWIIDSGATNHVCSSLYLFSHYKACFTHSTLKLPDGTDHLIIHVSSVILSPL 157
           S S  S S+WI+DSGAT+HVC S   F  +    T+ ++ LP+G    +    SV L   
Sbjct: 120 SSSSNSSSLWILDSGATHHVCYSQASFEPFVP--TYYSVALPNGHTVSVHGTGSVRLCND 177

Query: 156 LRLDNVLFVPTFHFNLLSISDLVKSHPISITFTNDSYIFQDQLSKKTIGL 7
           L L NVLFVP FH+NLLSIS L + HP  ++F +D Y+ +D    + IG+
Sbjct: 178 LTLQNVLFVPQFHWNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGI 227


>emb|CBI24911.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/111 (44%), Positives = 65/111 (58%)
 Frame = -1

Query: 339 ISLSCFSKSIWIIDSGATNHVCSSLYLFSHYKACFTHSTLKLPDGTDHLIIHVSSVILSP 160
           I  S  S S+WI+DSGAT+HVC S   F  +   F +S + LP+G    +    SV L  
Sbjct: 230 IPSSSNSSSLWILDSGATHHVCYSRASFEPFTPTF-NSFVALPNGHTVPVGGTGSVRLCN 288

Query: 159 LLRLDNVLFVPTFHFNLLSISDLVKSHPISITFTNDSYIFQDQLSKKTIGL 7
            L L NVLFVP FH NLLSIS L + HP  ++F +D Y+ +D    + IG+
Sbjct: 289 DLTLQNVLFVPQFHCNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGI 339


>ref|XP_002278097.1| PREDICTED: uncharacterized protein LOC100260149 [Vitis vinifera]
          Length = 359

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/111 (44%), Positives = 65/111 (58%)
 Frame = -1

Query: 339 ISLSCFSKSIWIIDSGATNHVCSSLYLFSHYKACFTHSTLKLPDGTDHLIIHVSSVILSP 160
           I  S  S S+WI+DSGAT+HVC S   F  +   F +S + LP+G    +    SV L  
Sbjct: 230 IPSSSNSSSLWILDSGATHHVCYSRASFEPFTPTF-NSFVALPNGHTVPVGGTGSVRLCN 288

Query: 159 LLRLDNVLFVPTFHFNLLSISDLVKSHPISITFTNDSYIFQDQLSKKTIGL 7
            L L NVLFVP FH NLLSIS L + HP  ++F +D Y+ +D    + IG+
Sbjct: 289 DLTLQNVLFVPQFHCNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGI 339


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
 Frame = -1

Query: 357 QANLTGISLSCFSKSI---WIIDSGATNHVCSSLYLFSHYKACFTHSTLKLPDGTDHLII 187
           Q N    +LS    ++   WIIDSGAT+H+  S  +FS YK C  +  +K+ DG+   I 
Sbjct: 339 QGNYLIAALSSIKSNVHCPWIIDSGATDHMTGSSQIFSSYKPCAGNKKIKIXDGSLSAIA 398

Query: 186 HVSSVILSPLLRLDNVLFVPTFHFNLLSISDLVKSHPISITFTNDSYIFQDQLSKKTIG 10
              SV +SP L L NVL VP    NLLSIS + + H     F      FQ+  S +TIG
Sbjct: 399 GKGSVFISPSLTLHNVLHVPNLSCNLLSISKITQDHQCQANFYPSYCEFQELTSGRTIG 457


Top