BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039079
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   100   1e-19
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    88   6e-16
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    86   2e-15
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
 Frame = -2

Query: 503 YIATSDDYELVHFVS----------NEVKVYSLRKESWERTIRGVGYNITKEATSGIFVQ 354
           Y +  DDY+LV              +EVKVYSLRK+SW R I  + Y +     +G+F  
Sbjct: 153 YDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRR-IGDMPYCVHYPGANGVFAN 211

Query: 353 GALHWKTIQSIEENHHLKVVIAYDMVDKKFREVSQPHYDAGYYHTLVSVLDGFLCMFCRY 174
           GALHW   ++ E N    +V+A D+  + +REV QP Y    ++  + VL G LC    +
Sbjct: 212 GALHWVVGENPESNV-ANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANF 270

Query: 173 EHHTV-AWVMKDYGMKESWTKLYSVEE 96
               V  W+MK+YG+KESWTKL+SV +
Sbjct: 271 LGERVDVWMMKEYGVKESWTKLFSVAQ 297


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 19/169 (11%)
 Frame = -2

Query: 455 EVKVYSLRKESWERTIRGVG----------YNITKEATSGIFVQGALHWKTIQSIEENHH 306
           EVKVYSL+ + W++ I G+           ++I      G+F   ALHW   Q  E    
Sbjct: 176 EVKVYSLKNDKWKK-IEGLPIRLRLLSKPFFHILNRRGYGVFAGHALHWIVPQRRELGIR 234

Query: 305 LKVVIAYDMVDKKFREVSQPHYD--AGYYHTLVSVLDGFLCMFCRYEHHTV-AWVMKDYG 135
              V+ +D+ D KF E+ QP Y+     +H  V VL+G LC+ C YEH  V  WVMK+YG
Sbjct: 235 -DCVLGFDIRDDKFFELPQPDYENKGMNFHVDVGVLEGNLCVMCNYEHVCVDVWVMKEYG 293

Query: 134 MKESWTKLYSVEEPRKFS------PLHLPEKLGSYIIHEPHGDLLVLYN 6
           +KESW K++SV   +  S      PL +  K G  ++ E +G+ L+ Y+
Sbjct: 294 VKESWCKMFSVHAIKWISAFMFLRPL-VYSKGGDMVLLEVNGEKLLWYD 341


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 16/183 (8%)
 Frame = -2

Query: 503 YIATSDDYELV--------HFVSNEVKVYSLRKESWERTIRGVGYNITKEATSGIFVQGA 348
           Y   ++DY++V        +F+  +VKVYS+   SW R I+   +  +    SG FV G 
Sbjct: 196 YDHVNEDYKVVAVFCDPSEYFIECKVKVYSMATNSW-RKIQDFPHGFSPFQNSGKFVSGT 254

Query: 347 LHWKTIQSIEENHHLKVVIAYDMVDKKFREVSQPHYDAGYYHTL-VSVLDGFLCMFCRYE 171
           L+W    SI  +  L V+++ D+  + +REV  P Y+     T  + VL G LCM   Y+
Sbjct: 255 LNWAANHSIGSSS-LWVIVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQGCLCMNYDYK 313

Query: 170 H-HTVAWVMKDYGMKESWTKLYS---VEEPRKFS---PLHLPEKLGSYIIHEPHGDLLVL 12
             H V W+MKDYG +ESW KL S   V  P  FS   P ++ E     ++ E     L+L
Sbjct: 314 KTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLMFEFD---LIL 370

Query: 11  YNP 3
           YNP
Sbjct: 371 YNP 373


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
 Frame = -2

Query: 503 YIATSDDYELV---HFVS-------NEVKVYSLRKESWERTIRGVGYNITKEATSGIFVQ 354
           Y + +DDY+LV   +FV        + VK+Y++R + W +T+  + Y +    T G+FV 
Sbjct: 147 YDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVW-KTLPSMPYALCCARTMGVFVS 205

Query: 353 GALHWKTIQSIEENHHLKVVIAYDMVDKKFREVSQPHYDAGYYHTLVSVLDGFLCMF-CR 177
           GALHW   + +E      +++A+D+  + FREV+ P    G +   V++L G LC+   R
Sbjct: 206 GALHWVVTRDLEPESR-DLIVAFDLRFEVFREVALPGTVDGKFDMDVALLRGMLCIIENR 264

Query: 176 YEHHTVAWVMKDYGMKESWTKLYSVEEPRKFSPLHLPEKLG 54
                  WVM++YG  +SW K+++V +PR    +   + LG
Sbjct: 265 GSDGFDVWVMREYGSHDSWCKMFTVGQPRDVKLMKSLKPLG 305


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
 Frame = -2

Query: 491 SDDYELVHFVSN-----------EVKVYSLRKESWERT---------IRGVGYNITKEAT 372
           ++DY++V F+             EVKVYSL+  SW+R          I    Y+      
Sbjct: 154 NEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRG 213

Query: 371 SGIFVQGALHWK-TIQSIEENHHLKVVIAYDMVDKKFREVSQPHYDAGYYHTLVSVLDGF 195
            G+F   A+HWK T+    + +   +++A+D+  ++F+ + QP Y +  +   V VL G 
Sbjct: 214 YGVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGC 273

Query: 194 LCMFCRYEHHTV-AWVMKDYGMKESWTKLYSV 102
           LC+FC      V  WVMK+YG+KESWT L +V
Sbjct: 274 LCVFCNKNCKQVEIWVMKEYGVKESWTHLCTV 305