BLASTX nr result

ID: Coptis24_contig00039074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039074
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528911.1| DNA binding protein, putative [Ricinus commu...    64   1e-08
ref|XP_002300300.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002518295.1| DNA binding protein, putative [Ricinus commu...    62   4e-08
ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like ...    62   6e-08
ref|XP_003516628.1| PREDICTED: transcription factor bHLH25-like ...    62   6e-08

>ref|XP_002528911.1| DNA binding protein, putative [Ricinus communis]
           gi|223531665|gb|EEF33491.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 331

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/45 (62%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   VVNSSVIPFGTSTLDITVMAQMDEEFNMTVKDLAKNLRSAFVQFM 135
           ++N++V+PFG+STLDIT++AQMDE  +M VKDL KNLR A ++FM
Sbjct: 287 IINNTVLPFGSSTLDITIIAQMDENNSMAVKDLVKNLRVALLKFM 331


>ref|XP_002300300.1| predicted protein [Populus trichocarpa] gi|222847558|gb|EEE85105.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +1

Query: 1   VVNSSVIPFGTSTLDITVMAQMDEEFNMTVKDLAKNLRSAFVQFM 135
           V+NSSV+ FGT  LD+T++AQMD +FNM+VKDL K L SAF  FM
Sbjct: 138 VINSSVLTFGTCALDVTIIAQMDIDFNMSVKDLVKTLHSAFQYFM 182


>ref|XP_002518295.1| DNA binding protein, putative [Ricinus communis]
           gi|223542515|gb|EEF44055.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 309

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   VVNSSVIPFGTSTLDITVMAQMDEEFNMTVKDLAKNLRSAFVQFM 135
           V NSSV+ FG+S LD+T++AQMD EF+M+VKDL K+L SAF  FM
Sbjct: 265 VTNSSVLTFGSSALDVTIIAQMDNEFSMSVKDLVKDLHSAFKLFM 309


>ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
          Length = 365

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +1

Query: 1   VVNSSVIPFGTSTLDITVMAQMDEEFNMTVKDLAKNLRSAFVQFM 135
           VVNSSV+PFG   +DITV+AQM +E  +TVKDL  NLR AF++FM
Sbjct: 321 VVNSSVLPFGKHAMDITVVAQMGDELQVTVKDLVNNLRLAFLKFM 365


>ref|XP_003516628.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
          Length = 423

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/45 (60%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   VVNSSVIPFGTSTLDITVMAQMDEEFNMTVKDLAKNLRSAFVQFM 135
           V+NSS++ FGTS LDIT++A+MDEEF+++VK+LA+ LR   +QFM
Sbjct: 379 VINSSILLFGTSKLDITIVAEMDEEFSLSVKELARKLRIGLMQFM 423


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