BLASTX nr result
ID: Coptis24_contig00039066
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039066 (271 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315678.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-09 ref|XP_002266484.2| PREDICTED: uncharacterized protein LOC100246... 60 3e-08 ref|XP_002312681.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 emb|CBI28587.3| unnamed protein product [Vitis vinifera] 57 2e-06 gb|ABK96386.1| unknown [Populus trichocarpa x Populus deltoides] 55 8e-06 >ref|XP_002315678.1| predicted protein [Populus trichocarpa] gi|222864718|gb|EEF01849.1| predicted protein [Populus trichocarpa] Length = 466 Score = 67.0 bits (162), Expect = 2e-09 Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 3/91 (3%) Frame = -2 Query: 264 QTKTTLMHQNHKKLTRHKNSSSMASTYC--KILPIIPIYFVCFLLFISSAISPVFARSIT 91 QT TT K+ TR N S+MAS++C K+ PII + F+CFLL SS I PVF+ S T Sbjct: 30 QTNTTTTADLAKE-TRQGNFSNMASSWCYKKMSPIISV-FLCFLLVASSNICPVFS-SET 86 Query: 90 SETKANNQTFQPRDELQ-LKRVRAHLRKINK 1 A NQTF+P++ELQ LK +R L KINK Sbjct: 87 RSGHATNQTFRPQEELQKLKIIRERLDKINK 117 >ref|XP_002266484.2| PREDICTED: uncharacterized protein LOC100246465, partial [Vitis vinifera] Length = 344 Score = 60.1 bits (144), Expect(2) = 3e-08 Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 2/71 (2%) Frame = -2 Query: 207 SSSMASTYCKILPIIPIYFVCFLLFISSAISPVFARSITSET-KANNQTFQPRDELQ-LK 34 SS+MAS+YCKI PIIPI FV FLL SS S +SET + NQTF+P +EL+ LK Sbjct: 51 SSNMASSYCKISPIIPI-FVSFLLVASSVCS-----VHSSETDRPANQTFRPGEELEKLK 104 Query: 33 RVRAHLRKINK 1 +R HL KINK Sbjct: 105 IIRDHLLKINK 115 Score = 22.7 bits (47), Expect(2) = 3e-08 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = -3 Query: 266 HRRRQH*CTK 237 HRRRQH CT+ Sbjct: 28 HRRRQHQCTQ 37 >ref|XP_002312681.1| predicted protein [Populus trichocarpa] gi|222852501|gb|EEE90048.1| predicted protein [Populus trichocarpa] Length = 416 Score = 61.6 bits (148), Expect = 6e-08 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 3/69 (4%) Frame = -2 Query: 198 MASTYC--KILPIIPIYFVCFLLFISSAISPVFARSITSETKANNQTFQPRDELQ-LKRV 28 MAS++C KI +I + FVCFLL +SS I PV + S T A NQTF+P++ELQ LK + Sbjct: 1 MASSWCNKKISSVISV-FVCFLLVVSSKICPV-SSSETGSRHATNQTFRPQEELQKLKYI 58 Query: 27 RAHLRKINK 1 R HL KINK Sbjct: 59 RKHLEKINK 67 >emb|CBI28587.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 56.6 bits (135), Expect = 2e-06 Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Frame = -2 Query: 198 MASTYCKILPIIPIYFVCFLLFISSAISPVFARSITSET-KANNQTFQPRDELQ-LKRVR 25 MAS+YCKI PIIPI FV FLL SS S +SET + NQTF+P +EL+ LK +R Sbjct: 1 MASSYCKISPIIPI-FVSFLLVASSVCS-----VHSSETDRPANQTFRPGEELEKLKIIR 54 Query: 24 AHLRKINK 1 HL KINK Sbjct: 55 DHLLKINK 62 >gb|ABK96386.1| unknown [Populus trichocarpa x Populus deltoides] Length = 478 Score = 54.7 bits (130), Expect = 8e-06 Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 6/91 (6%) Frame = -2 Query: 255 TTLMHQNHKKLTRHKNSSSMA-STYCKILPIIPIYFVCFLLFISSAISPVFAR-SITSET 82 TT+ Q RH++S MA ST P+IPI FV FLL +S++SPV + ++ S++ Sbjct: 40 TTIQRQQ-----RHRHSKKMAASTSLSTHPMIPI-FVAFLLVFASSVSPVLSSPALVSDS 93 Query: 81 KAN---NQTFQPRDE-LQLKRVRAHLRKINK 1 + NQTF+P E L+L+R A+L+KINK Sbjct: 94 GSRLLANQTFRPSKEVLRLRRANAYLKKINK 124