BLASTX nr result

ID: Coptis24_contig00039025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039025
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517694.1| PREDICTED: uncharacterized protein LOC100787...   105   3e-21
ref|XP_002310866.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_003628896.1| Geminivirus Rep-interacting motor protein, p...    99   3e-19
ref|XP_003533419.1| PREDICTED: uncharacterized protein LOC100796...    99   4e-19
ref|XP_002533960.1| Myosin-1, putative [Ricinus communis] gi|223...    99   5e-19

>ref|XP_003517694.1| PREDICTED: uncharacterized protein LOC100787852 [Glycine max]
          Length = 997

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/85 (57%), Positives = 72/85 (84%)
 Frame = -3

Query: 261 QVIREKIKDHFKMNSGPSVTVSELAEKIDELVTKVISLETAVSTQTALLKRLRTENDDFQ 82
           Q+++E IK+HF+ +S  S++V+E+AEKIDELV KVISLETAVS+QT ++ RLRT+ D+ Q
Sbjct: 332 QLLKENIKEHFETSSNSSLSVAEMAEKIDELVNKVISLETAVSSQTVMVTRLRTDTDELQ 391

Query: 81  EDLQSLEEDKATLLQDSNKLNEKLK 7
           E +++LE DK +L++D NKLNE+L+
Sbjct: 392 EQIRTLENDKESLIKDRNKLNEQLR 416


>ref|XP_002310866.1| predicted protein [Populus trichocarpa] gi|222853769|gb|EEE91316.1|
           predicted protein [Populus trichocarpa]
          Length = 1003

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/87 (56%), Positives = 69/87 (79%)
 Frame = -3

Query: 267 DPQVIREKIKDHFKMNSGPSVTVSELAEKIDELVTKVISLETAVSTQTALLKRLRTENDD 88
           D +++REKIK++  + S  SVT +EL EKIDELV K+I+LE +VS+QTAL++RLRTE D+
Sbjct: 332 DIELLREKIKENLDVGSNASVTAAELVEKIDELVNKIINLEASVSSQTALIQRLRTETDE 391

Query: 87  FQEDLQSLEEDKATLLQDSNKLNEKLK 7
            Q ++Q+LEEDKATL+   N L E+L+
Sbjct: 392 LQAEIQTLEEDKATLINGKNDLREQLR 418


>ref|XP_003628896.1| Geminivirus Rep-interacting motor protein, partial [Medicago
           truncatula] gi|355522918|gb|AET03372.1| Geminivirus
           Rep-interacting motor protein, partial [Medicago
           truncatula]
          Length = 734

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/85 (57%), Positives = 69/85 (81%)
 Frame = -3

Query: 261 QVIREKIKDHFKMNSGPSVTVSELAEKIDELVTKVISLETAVSTQTALLKRLRTENDDFQ 82
           Q+++EKIK+HF+  S  ++TVSE+AEKIDELVTKVISLE+AVS+QTAL+K L+ E D+  
Sbjct: 117 QLLQEKIKEHFEAGSNSTLTVSEMAEKIDELVTKVISLESAVSSQTALVKNLKDETDELH 176

Query: 81  EDLQSLEEDKATLLQDSNKLNEKLK 7
             +++LE +K +L+ D  KLNEKL+
Sbjct: 177 SLVRNLETEKESLVNDKVKLNEKLR 201


>ref|XP_003533419.1| PREDICTED: uncharacterized protein LOC100796838 [Glycine max]
          Length = 993

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/87 (51%), Positives = 71/87 (81%)
 Frame = -3

Query: 261 QVIREKIKDHFKMNSGPSVTVSELAEKIDELVTKVISLETAVSTQTALLKRLRTENDDFQ 82
           Q+++E IK+HF+ +S  S++V+E+AE+IDELV KVI LETAVS+Q+ ++KRL T+ D+  
Sbjct: 332 QLLKENIKEHFETSSNSSLSVAEMAEQIDELVNKVIRLETAVSSQSVMVKRLTTDTDELH 391

Query: 81  EDLQSLEEDKATLLQDSNKLNEKLKLL 1
           E +++LE DK +L++D NKLN++L+ L
Sbjct: 392 EQIRTLENDKESLIKDKNKLNDQLRKL 418


>ref|XP_002533960.1| Myosin-1, putative [Ricinus communis] gi|223526073|gb|EEF28429.1|
           Myosin-1, putative [Ricinus communis]
          Length = 1089

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/87 (57%), Positives = 66/87 (75%)
 Frame = -3

Query: 267 DPQVIREKIKDHFKMNSGPSVTVSELAEKIDELVTKVISLETAVSTQTALLKRLRTENDD 88
           D +++R KI +HF++ S  S++VSELAEKIDELV KVISLE +VS+QTAL++RLRTE D+
Sbjct: 331 DLELLRVKISEHFEVGSNASLSVSELAEKIDELVNKVISLEASVSSQTALIQRLRTETDE 390

Query: 87  FQEDLQSLEEDKATLLQDSNKLNEKLK 7
            Q  +  LE DKATL+   N L  KL+
Sbjct: 391 LQAQIGILENDKATLIHGKNDLRVKLR 417


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