BLASTX nr result

ID: Coptis24_contig00039018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039018
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182309.1| glutaredoxin-C13 [Arabidopsis thaliana] gi|2977...    71   8e-11
ref|XP_002881118.1| glutaredoxin family protein [Arabidopsis lyr...    67   1e-09
ref|NP_180612.1| monothiol glutaredoxin-S9 [Arabidopsis thaliana...    67   1e-09
ref|XP_002268050.1| PREDICTED: glutaredoxin-C13 [Vitis vinifera]       66   3e-09
ref|XP_002320646.1| glutaredoxin [Populus trichocarpa] gi|222861...    64   1e-08

>ref|NP_182309.1| glutaredoxin-C13 [Arabidopsis thaliana]
           gi|297790318|ref|XP_002863058.1| glutaredoxin family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297824893|ref|XP_002880329.1| glutaredoxin family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|75100580|sp|O82255.1|GRC13_ARATH RecName:
           Full=Glutaredoxin-C13; Short=AtGrxC13; AltName:
           Full=Protein ROXY 9 gi|3738300|gb|AAC63642.1| putative
           glutaredoxin [Arabidopsis thaliana]
           gi|20197557|gb|AAM15127.1| putative glutaredoxin
           [Arabidopsis thaliana] gi|21554200|gb|AAM63279.1|
           putative glutaredoxin [Arabidopsis thaliana]
           gi|62320234|dbj|BAD94488.1| putative glutaredoxin
           [Arabidopsis thaliana] gi|90962952|gb|ABE02400.1|
           At2g47880 [Arabidopsis thaliana]
           gi|226348196|gb|ACO50414.1| glutaredoxin [Arabidopsis
           thaliana] gi|297308864|gb|EFH39317.1| glutaredoxin
           family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326168|gb|EFH56588.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|330255810|gb|AEC10904.1| glutaredoxin-C13
           [Arabidopsis thaliana]
          Length = 102

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = -2

Query: 233 STAVPAVFIGGTLIGSTNEVMSLHLEGSLVPLLKPYQTTL 114
           STAVPAVF+GG L+GSTNEVMSLHL GSLVPL+KPYQ+ L
Sbjct: 62  STAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSIL 101


>ref|XP_002881118.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326957|gb|EFH57377.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -2

Query: 233 STAVPAVFIGGTLIGSTNEVMSLHLEGSLVPLLKPYQTTL 114
           ST VPA+F+GG LIGSTNEVMSLHL GSLVPL+KP+Q  L
Sbjct: 62  STPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQANL 101


>ref|NP_180612.1| monothiol glutaredoxin-S9 [Arabidopsis thaliana]
           gi|75317810|sp|O04341.1|GRXS9_ARATH RecName:
           Full=Monothiol glutaredoxin-S9; Short=AtGrxS9; AltName:
           Full=Protein ROXY 7 gi|1946365|gb|AAB63083.1| putative
           glutaredoxin [Arabidopsis thaliana]
           gi|21593494|gb|AAM65461.1| putative glutaredoxin
           [Arabidopsis thaliana] gi|22022556|gb|AAM83235.1|
           At2g30540/T6B20.11 [Arabidopsis thaliana]
           gi|24111317|gb|AAN46782.1| At2g30540/T6B20.11
           [Arabidopsis thaliana] gi|226348192|gb|ACO50412.1|
           glutaredoxin [Arabidopsis thaliana]
           gi|330253311|gb|AEC08405.1| monothiol glutaredoxin-S9
           [Arabidopsis thaliana]
          Length = 102

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -2

Query: 233 STAVPAVFIGGTLIGSTNEVMSLHLEGSLVPLLKPYQTTL 114
           ST VPA+F+GG LIGSTNEVMSLHL GSLVPL+KP+Q  L
Sbjct: 62  STPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQANL 101


>ref|XP_002268050.1| PREDICTED: glutaredoxin-C13 [Vitis vinifera]
          Length = 102

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = -2

Query: 224 VPAVFIGGTLIGSTNEVMSLHLEGSLVPLLKPYQTTL 114
           VPAVFIGG L+GSTNEVMS HL GSL+PLLKPYQ TL
Sbjct: 65  VPAVFIGGKLVGSTNEVMSRHLSGSLIPLLKPYQQTL 101


>ref|XP_002320646.1| glutaredoxin [Populus trichocarpa] gi|222861419|gb|EEE98961.1|
           glutaredoxin [Populus trichocarpa]
          Length = 99

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 224 VPAVFIGGTLIGSTNEVMSLHLEGSLVPLLKPYQ 123
           VPAVFIGG L+GSTNEVMSLHL GSL+P+LKPYQ
Sbjct: 65  VPAVFIGGKLMGSTNEVMSLHLSGSLIPMLKPYQ 98


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