BLASTX nr result

ID: Coptis24_contig00039010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039010
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311660.1| magnesium transporter [Populus trichocarpa] ...   103   2e-20
ref|XP_003559849.1| PREDICTED: magnesium transporter MRS2-I-like...   100   2e-19
ref|XP_002284188.1| PREDICTED: magnesium transporter MRS2-I isof...    99   4e-19
ref|XP_002284181.1| PREDICTED: magnesium transporter MRS2-I isof...    99   4e-19
ref|XP_002517021.1| RNA splicing protein mrs2, mitochondrial, pu...    99   5e-19

>ref|XP_002311660.1| magnesium transporter [Populus trichocarpa]
           gi|222851480|gb|EEE89027.1| magnesium transporter
           [Populus trichocarpa]
          Length = 394

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/62 (72%), Positives = 55/62 (88%)
 Frame = -2

Query: 334 SGTVCLSIYSLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLI 155
           SGTVCLSIYSLVAGIFGM+I Y WN+NHGYMFKWVVIVT + CA+++I+++  AR KGL+
Sbjct: 333 SGTVCLSIYSLVAGIFGMNIPYTWNDNHGYMFKWVVIVTGVFCASLFIVLMTYARHKGLV 392

Query: 154 GS 149
           GS
Sbjct: 393 GS 394


>ref|XP_003559849.1| PREDICTED: magnesium transporter MRS2-I-like [Brachypodium
           distachyon]
          Length = 387

 Score =  100 bits (248), Expect = 2e-19
 Identities = 41/62 (66%), Positives = 54/62 (87%)
 Frame = -2

Query: 334 SGTVCLSIYSLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLI 155
           SGTVCLS+YSLVAGIFGM+I Y WNENHGY+FKWVV+++ +VCA +++ ++  AR KGL+
Sbjct: 326 SGTVCLSLYSLVAGIFGMNIPYTWNENHGYIFKWVVLISGLVCALMFVFVVAYARHKGLV 385

Query: 154 GS 149
           GS
Sbjct: 386 GS 387


>ref|XP_002284188.1| PREDICTED: magnesium transporter MRS2-I isoform 2 [Vitis vinifera]
          Length = 374

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/62 (69%), Positives = 54/62 (87%)
 Frame = -2

Query: 334 SGTVCLSIYSLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLI 155
           SGTVCLSIYSLVAGIFGM+I Y WN++HG+MFKWVVIVT + CA ++++I+  AR KGL+
Sbjct: 313 SGTVCLSIYSLVAGIFGMNIPYTWNDDHGFMFKWVVIVTGVSCALLFVVIMSYARHKGLV 372

Query: 154 GS 149
           GS
Sbjct: 373 GS 374


>ref|XP_002284181.1| PREDICTED: magnesium transporter MRS2-I isoform 1 [Vitis vinifera]
           gi|297737159|emb|CBI26360.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/62 (69%), Positives = 54/62 (87%)
 Frame = -2

Query: 334 SGTVCLSIYSLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLI 155
           SGTVCLSIYSLVAGIFGM+I Y WN++HG+MFKWVVIVT + CA ++++I+  AR KGL+
Sbjct: 328 SGTVCLSIYSLVAGIFGMNIPYTWNDDHGFMFKWVVIVTGVSCALLFVVIMSYARHKGLV 387

Query: 154 GS 149
           GS
Sbjct: 388 GS 389


>ref|XP_002517021.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus
           communis] gi|223543656|gb|EEF45184.1| RNA splicing
           protein mrs2, mitochondrial, putative [Ricinus communis]
          Length = 398

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -2

Query: 334 SGTVCLSIYSLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLI 155
           +GTVCLS YSLVAGIFGM+I Y WN+N+GYMFKWVVIVT   CAA++ILI+  AR KGL+
Sbjct: 337 AGTVCLSFYSLVAGIFGMNIPYTWNDNYGYMFKWVVIVTGACCAAMFILIMSYARYKGLV 396

Query: 154 GS 149
           GS
Sbjct: 397 GS 398


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