BLASTX nr result

ID: Coptis24_contig00039003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039003
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycin...   154   5e-36
ref|XP_002272624.2| PREDICTED: uncharacterized protein LOC100244...   154   9e-36
emb|CAN59868.1| hypothetical protein VITISV_013440 [Vitis vinifera]   154   9e-36
ref|XP_002522818.1| transcription factor, putative [Ricinus comm...   151   6e-35
ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260...   149   3e-34

>ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycine max]
           gi|255636705|gb|ACU18688.1| unknown [Glycine max]
          Length = 441

 Score =  154 bits (390), Expect = 5e-36
 Identities = 80/111 (72%), Positives = 89/111 (80%), Gaps = 7/111 (6%)
 Frame = -1

Query: 312 HD-SSRNNLSSILTMKTGRSGCSRSISNLRDVIHGSKRHLDKAPICSPRSIGSSELINPI 136
           HD  +R  LS+ILT + GRSGCSRSI+NL+DVIHGSKRHLDK P CSPRSIGSSE +NPI
Sbjct: 38  HDPKTRKQLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPI 97

Query: 135 AHEVVLSDSRCELKITGF----INGTNEGGCGSNA--GSTFVGTLRPGTPG 1
            HEV+LS+SRCELKITG+      G   GG GSNA  GSTFVGTLRPGTPG
Sbjct: 98  THEVILSNSRCELKITGYGGFQEGGVGSGGGGSNAGGGSTFVGTLRPGTPG 148


>ref|XP_002272624.2| PREDICTED: uncharacterized protein LOC100244205 [Vitis vinifera]
          Length = 442

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/103 (73%), Positives = 86/103 (83%), Gaps = 4/103 (3%)
 Frame = -1

Query: 297 NNLSSILTMKTGRSGCSRSISNLRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEVVL 118
           +NLS+ILT KTGRSGCSRSISNL+DVIHGSKRH++K   CSPRSIGSSEL+NPI HEVVL
Sbjct: 52  SNLSAILTKKTGRSGCSRSISNLKDVIHGSKRHIEKPATCSPRSIGSSELLNPITHEVVL 111

Query: 117 SDSRCELKITG----FINGTNEGGCGSNAGSTFVGTLRPGTPG 1
           ++S CELKITG    F  G   GG G+ AGSTFVGTL+PGTPG
Sbjct: 112 NNSTCELKITGFGGAFQEGNGGGGAGAGAGSTFVGTLKPGTPG 154


>emb|CAN59868.1| hypothetical protein VITISV_013440 [Vitis vinifera]
          Length = 435

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/103 (73%), Positives = 86/103 (83%), Gaps = 4/103 (3%)
 Frame = -1

Query: 297 NNLSSILTMKTGRSGCSRSISNLRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEVVL 118
           +NLS+ILT KTGRSGCSRSISNL+DVIHGSKRH++K   CSPRSIGSSEL+NPI HEVVL
Sbjct: 28  SNLSAILTKKTGRSGCSRSISNLKDVIHGSKRHIEKPATCSPRSIGSSELLNPITHEVVL 87

Query: 117 SDSRCELKITG----FINGTNEGGCGSNAGSTFVGTLRPGTPG 1
           ++S CELKITG    F  G   GG G+ AGSTFVGTL+PGTPG
Sbjct: 88  NNSTCELKITGFGGAFQEGNGGGGAGAGAGSTFVGTLKPGTPG 130


>ref|XP_002522818.1| transcription factor, putative [Ricinus communis]
           gi|223537902|gb|EEF39516.1| transcription factor,
           putative [Ricinus communis]
          Length = 385

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/118 (67%), Positives = 89/118 (75%), Gaps = 14/118 (11%)
 Frame = -1

Query: 312 HD-SSRNNLSSILTMKTGRSGCSRSISNLRDVIHGSKRHLDKAPICSPRSIGSSELINPI 136
           HD  SR  LS+ILT K GRSGCSRSI+NL+DVIHGSKRH +K P CSPRSIGSSE +NPI
Sbjct: 22  HDPKSRKQLSTILTRKAGRSGCSRSIANLKDVIHGSKRHTEKPPSCSPRSIGSSEFLNPI 81

Query: 135 AHEVVLSDSRCELKITGF-----------INGTN--EGGCGSNAGSTFVGTLRPGTPG 1
            HEV+LS+SRCELKITGF             GTN   GG G++ GSTFVGTLRPGTPG
Sbjct: 82  THEVILSNSRCELKITGFGGFQEGIGTGSGGGTNNGSGGGGNSGGSTFVGTLRPGTPG 139


>ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260605 [Vitis vinifera]
          Length = 483

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/111 (68%), Positives = 86/111 (77%), Gaps = 7/111 (6%)
 Frame = -1

Query: 312 HD-SSRNNLSSILTMKTGRSGCSRSISNLRDVIHGSKRHLDKAPICSPRSIGSSELINPI 136
           HD  +R  LS+ILT K  RSGCSRSI+NL+DVIHGSKRH++K P CSPRSIGSSE +NPI
Sbjct: 76  HDPKARRQLSTILTKKPCRSGCSRSIANLKDVIHGSKRHMEKPPSCSPRSIGSSEFLNPI 135

Query: 135 AHEVVLSDSRCELKITGF------INGTNEGGCGSNAGSTFVGTLRPGTPG 1
            HEV+LS+SRCELKITGF        G   GG G+  GSTFVGTLRPGTPG
Sbjct: 136 THEVILSNSRCELKITGFGGFQEGGGGGGGGGVGTGGGSTFVGTLRPGTPG 186


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