BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039002
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...    61   8e-08
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like A...    56   3e-06
ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max]           55   6e-06

>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/43 (62%), Positives = 37/43 (86%)
 Frame = -1

Query: 263 SSKALVSSQSFVANGTDKFGYNVVQGSVGQNYDIVLAVRQKDD 135
           SSKALV ++SFV NGT+  GY+V+QG+ G +YDIV+AVRQK++
Sbjct: 780 SSKALVQAKSFVNNGTENIGYSVIQGTAGNSYDIVVAVRQKEE 822


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 36/42 (85%)
 Frame = -1

Query: 260  SKALVSSQSFVANGTDKFGYNVVQGSVGQNYDIVLAVRQKDD 135
            SKA++ S+  +A+ T+  GY+++QGSVGQNYDIVLAVRQKD+
Sbjct: 1002 SKAMIQSRDHLASKTENEGYSIIQGSVGQNYDIVLAVRQKDE 1043


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Cucumis sativus]
          Length = 1463

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 36/42 (85%)
 Frame = -1

Query: 260  SKALVSSQSFVANGTDKFGYNVVQGSVGQNYDIVLAVRQKDD 135
            SKA++ S+  +A+ T+  GY+++QGSVGQNYDIVLAVRQKD+
Sbjct: 1029 SKAMIQSRDHLASKTENEGYSIIQGSVGQNYDIVLAVRQKDE 1070


>ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like At1g52040-like [Glycine
           max]
          Length = 594

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -1

Query: 260 SKALVSSQSFVANGTDKFGYNVVQGSVGQNYDIVLAVRQKDD 135
           SKAL  SQ+++ N  D   Y+V+QGSVGQ YDIVLA++QKDD
Sbjct: 161 SKALSFSQNYMTNTNDNASYSVIQGSVGQGYDIVLALKQKDD 202


>ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max]
          Length = 604

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -1

Query: 260 SKALVSSQSFVANGTDKFGYNVVQGSVGQNYDIVLAVRQKDD 135
           SKAL  SQ+ + N TD   Y+V+QGSVGQ+YDIVLA++QKDD
Sbjct: 171 SKALSYSQNNMTNTTDNGRYSVIQGSVGQDYDIVLALKQKDD 212