BLASTX nr result

ID: Coptis24_contig00039001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039001
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276375.1| PREDICTED: uncharacterized protein LOC100256...   177   6e-43
ref|XP_002527890.1| r2r3-myb transcription factor, putative [Ric...   173   1e-41
ref|XP_002281298.2| PREDICTED: myb protein-like [Vitis vinifera]      171   4e-41
ref|XP_003516915.1| PREDICTED: uncharacterized protein LOC100811...   171   6e-41
ref|XP_004162756.1| PREDICTED: uncharacterized LOC101212170 [Cuc...   170   1e-40

>ref|XP_002276375.1| PREDICTED: uncharacterized protein LOC100256309 [Vitis vinifera]
           gi|297740274|emb|CBI30456.3| unnamed protein product
           [Vitis vinifera]
          Length = 410

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/126 (69%), Positives = 100/126 (79%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   GIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARILRGRTDNA 182
           GI GRSGKSCRLRWCNQLDP V+RKPFT+EEDRIIVAAHAIHGNKWA IAR+L+GRTDNA
Sbjct: 75  GIAGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWASIARLLQGRTDNA 134

Query: 183 IKNHWNST-XXXXXXXXXXXXPSAKRMEHISLDKTKASSEETLSCGDVSSFRSSEGKDVN 359
           IKNHWNST              S   +E +SLDKTKASSEET+SCGD +S +S EGKDVN
Sbjct: 135 IKNHWNSTLRRRCMEIDRAKLESGNIVEDVSLDKTKASSEETMSCGDANSSKSLEGKDVN 194

Query: 360 FVESMS 377
             ++M+
Sbjct: 195 SSDNMA 200


>ref|XP_002527890.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223532741|gb|EEF34521.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 390

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/125 (67%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = +3

Query: 3   GIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARILRGRTDNA 182
           GI GRSGKSCRLRWCNQLDP V+RKPFT+EEDRII AAHA+HGNKWAVIAR+L GRTDNA
Sbjct: 78  GISGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIAAAHAVHGNKWAVIARLLPGRTDNA 137

Query: 183 IKNHWNSTXXXXXXXXXXXXPSAKRMEHIS-LDKTKASSEETLSCGDVSSFRSSEGKDVN 359
           IKNHWNST             ++  M+  + LDK KASSEET+SCGD +SF+S EGKDV+
Sbjct: 138 IKNHWNSTLRRKSTVCQRTRLASGNMDQDAYLDKAKASSEETISCGDANSFKSLEGKDVS 197

Query: 360 FVESM 374
            +++M
Sbjct: 198 SLDNM 202


>ref|XP_002281298.2| PREDICTED: myb protein-like [Vitis vinifera]
          Length = 330

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/126 (67%), Positives = 97/126 (76%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   GIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARILRGRTDNA 182
           GI GRSGKSCRLRWCN+LDP V+RKPFT+EEDRIIVA HAIHGNKWA IAR+L GRTDNA
Sbjct: 63  GIAGRSGKSCRLRWCNKLDPSVKRKPFTDEEDRIIVAVHAIHGNKWASIARLLLGRTDNA 122

Query: 183 IKNHWNST-XXXXXXXXXXXXPSAKRMEHISLDKTKASSEETLSCGDVSSFRSSEGKDVN 359
           IKNHWNST              S   ME ++ DKTKASSEET+SCGD +S +S EGKDVN
Sbjct: 123 IKNHWNSTLRRRCMEIDRAKLESGNIMEDVNSDKTKASSEETMSCGDANSSKSLEGKDVN 182

Query: 360 FVESMS 377
             ++M+
Sbjct: 183 SSDNMA 188


>ref|XP_003516915.1| PREDICTED: uncharacterized protein LOC100811740 [Glycine max]
          Length = 350

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/125 (69%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = +3

Query: 3   GIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARILRGRTDNA 182
           GI GRSGKSCRLRWCNQLDP V+RKPFT+EEDR+IVAAHAIHGNKWA IAR+L GRTDNA
Sbjct: 62  GISGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRMIVAAHAIHGNKWAAIARLLPGRTDNA 121

Query: 183 IKNHWNST-XXXXXXXXXXXXPSAKRMEHISLDKTKASSEETLSCGDVSSFRSSEGKDVN 359
           IKNHWNST              S   ME +SL+K KASSE+TLSCGDV S +SSEG+DV+
Sbjct: 122 IKNHWNSTLRRRGVGHDTIKLESVSFMEDVSLEKAKASSEDTLSCGDV-SLKSSEGRDVS 180

Query: 360 FVESM 374
            +E M
Sbjct: 181 SMEIM 185


>ref|XP_004162756.1| PREDICTED: uncharacterized LOC101212170 [Cucumis sativus]
          Length = 377

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/118 (70%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = +3

Query: 3   GIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARILRGRTDNA 182
           GI GRSGKSCRLRWCNQLDP V+RKPFT+EEDRIIVAAHA+HGNKWA IAR+L GRTDNA
Sbjct: 86  GIAGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAVHGNKWAAIARLLPGRTDNA 145

Query: 183 IKNHWNST-XXXXXXXXXXXXPSAKRMEHISLDKTKASSEETLSCGDVSSFRSSEGKD 353
           IKNHWNST              S   ++  SL+KTK SSEETLSCGDV+SF+S +GKD
Sbjct: 146 IKNHWNSTLRRRCTELERIKLESGNVVDDASLEKTKGSSEETLSCGDVNSFKSMDGKD 203


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