BLASTX nr result

ID: Coptis24_contig00038942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038942
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310354.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002513303.1| conserved hypothetical protein [Ricinus comm...   170   2e-40
emb|CBW30201.1| mTERF domain-containing protein, mitochondrial [...   168   8e-40
ref|XP_004145310.1| PREDICTED: uncharacterized protein LOC101222...   167   1e-39
emb|CBW30242.1| mTERF domain-containing protein, mitochondrial [...   166   2e-39

>ref|XP_002310354.1| predicted protein [Populus trichocarpa] gi|222853257|gb|EEE90804.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  172 bits (437), Expect = 3e-41
 Identities = 92/183 (50%), Positives = 124/183 (67%)
 Frame = -1

Query: 549 SPTFHNGEEDLSILETREVVSEILQEAGVCKEEAMNIVLKSPKYXXXXXXXXXXXDEHSL 370
           +P  +  +++    ET+E +S+ LQE G+   E+ +I L SPKY           +E + 
Sbjct: 63  NPVPYTSQQEAHFTETQEAISQFLQEFGISAAESNSIALNSPKYAKMLFDSVKDLEEWTS 122

Query: 369 WNSWSIENEDVGSLDFKKEVLYMAKQKGDNGVLPFLESVGLNPSSSTNIARYLVSESVPR 190
           W S    NE   +L FK++V YMAK+KGDNG + FLES+GL+ SSS N+ARYL  ES+P 
Sbjct: 123 WKSGGDGNE-FATLGFKEKVAYMAKEKGDNGKVAFLESLGLSLSSSMNVARYLHGESLPN 181

Query: 189 LIQKVKYIKEMLYPGSDNCEYVGKNARRMMTQLSIFVDEDVQQTLSFFEKMEAKRGGLNM 10
           L+ KVKY+KE+L+  SD+   VGK AR MM  LSI +DED+QQTLS FEK+EA+RGGL+M
Sbjct: 182 LVHKVKYMKEILFSDSDDKRLVGKYARCMMMNLSIPIDEDLQQTLSLFEKVEARRGGLDM 241

Query: 9   LGS 1
           LGS
Sbjct: 242 LGS 244


>ref|XP_002513303.1| conserved hypothetical protein [Ricinus communis]
           gi|223547211|gb|EEF48706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 574

 Score =  170 bits (430), Expect = 2e-40
 Identities = 91/199 (45%), Positives = 130/199 (65%)
 Frame = -1

Query: 597 TLSLHSNRFPTLLRQASPTFHNGEEDLSILETREVVSEILQEAGVCKEEAMNIVLKSPKY 418
           T  L  + FP     ++P+ +  E    + +TRE +S  L E G+  E++ +I    P+Y
Sbjct: 43  TQFLRKHFFPQCQNPSNPSPYLAEH---LDDTREAISHFLVEFGITIEDSTSIASNCPQY 99

Query: 417 XXXXXXXXXXXDEHSLWNSWSIENEDVGSLDFKKEVLYMAKQKGDNGVLPFLESVGLNPS 238
                      +E   WN+W  +  +  +L FK++VLYMAK+KGDNG + FLES+G   S
Sbjct: 100 AKMLIDSVKDLEE---WNAWKSDEMEFDALGFKEKVLYMAKEKGDNGKVAFLESLGFTLS 156

Query: 237 SSTNIARYLVSESVPRLIQKVKYIKEMLYPGSDNCEYVGKNARRMMTQLSIFVDEDVQQT 58
           S+ N+ARYL +ES+P LI KVKYIKEM + GSD+  ++G+NARRMM  LSI +D+D+QQT
Sbjct: 157 SAMNVARYLSTESLPALILKVKYIKEMFFSGSDDKGHIGRNARRMMMHLSIPIDDDLQQT 216

Query: 57  LSFFEKMEAKRGGLNMLGS 1
           LS FEK++A+RGGL+ LGS
Sbjct: 217 LSLFEKIQARRGGLDRLGS 235


>emb|CBW30201.1| mTERF domain-containing protein, mitochondrial [Musa balbisiana]
          Length = 610

 Score =  168 bits (425), Expect = 8e-40
 Identities = 91/172 (52%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
 Frame = -1

Query: 507 ETREVVSEILQEAGVCKEEAMNIVLKSPKYXXXXXXXXXXXDEHSLWNSWSIE----NED 340
           E RE V EIL+E G  +E+++ I   SP Y           DE  LW SW+ E    N D
Sbjct: 83  EAREAVVEILREFGASQEDSVYIAANSPCYVEMLVGNVQELDELGLWGSWNSEIMEGNVD 142

Query: 339 VGSLDFKKEVLYMAKQKGDNGVLPFLESVGLNPSSSTNIARYLVSESVPRLIQKVKYIKE 160
           + +L F+K+V YMAK KGD GVLP+LES+G+  SS+  IARYL SE +P+LI KV ++  
Sbjct: 143 MSALSFRKKVYYMAKSKGDKGVLPYLESIGVKLSSALLIARYLSSEKLPQLIDKVNFVCG 202

Query: 159 MLYPGSDNCEYVGKNARRMMTQLSIFVDEDVQQTLSFFEKMEAKRGGLNMLG 4
           +L+P S N   +G+NARRMM  LSI  DEDVQ TLSFFEKMEA+ GGL+MLG
Sbjct: 203 ILFPSSINKALIGRNARRMMMYLSIPADEDVQSTLSFFEKMEARHGGLSMLG 254


>ref|XP_004145310.1| PREDICTED: uncharacterized protein LOC101222814 [Cucumis sativus]
           gi|449472883|ref|XP_004153723.1| PREDICTED:
           uncharacterized protein LOC101222366 [Cucumis sativus]
           gi|449514567|ref|XP_004164414.1| PREDICTED:
           uncharacterized LOC101222366 [Cucumis sativus]
          Length = 594

 Score =  167 bits (424), Expect = 1e-39
 Identities = 89/172 (51%), Positives = 118/172 (68%)
 Frame = -1

Query: 516 SILETREVVSEILQEAGVCKEEAMNIVLKSPKYXXXXXXXXXXXDEHSLWNSWSIENEDV 337
           S+ E +  VSE LQ  GV ++EA++I   SP++           DE S+W+SWS E  ++
Sbjct: 77  SLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKMLVDAVRELDETSMWDSWSKERGEL 136

Query: 336 GSLDFKKEVLYMAKQKGDNGVLPFLESVGLNPSSSTNIARYLVSESVPRLIQKVKYIKEM 157
               FK++V  MA +KGD G + FLESVG+N SS+ N+ARYL  E +P LI KVKY+K +
Sbjct: 137 DGFGFKEKVASMAMEKGDCGKVAFLESVGMNLSSAMNVARYLSGEMLPSLIYKVKYMKAL 196

Query: 156 LYPGSDNCEYVGKNARRMMTQLSIFVDEDVQQTLSFFEKMEAKRGGLNMLGS 1
            + GS +   +GKNARRMMT LSI  D+DVQQTLSFFEK+EA+RGGL+ML S
Sbjct: 197 FFSGSGDGILIGKNARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSS 248


>emb|CBW30242.1| mTERF domain-containing protein, mitochondrial [Musa balbisiana]
          Length = 610

 Score =  166 bits (421), Expect = 2e-39
 Identities = 90/172 (52%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
 Frame = -1

Query: 507 ETREVVSEILQEAGVCKEEAMNIVLKSPKYXXXXXXXXXXXDEHSLWNSWSIE----NED 340
           E RE V EIL+E G  +E+++ I   SP Y           DE  LW SW+ E    N D
Sbjct: 83  EAREAVVEILREFGASQEDSVYIAANSPCYVEMLVGNVQELDELGLWGSWNSEIMEGNVD 142

Query: 339 VGSLDFKKEVLYMAKQKGDNGVLPFLESVGLNPSSSTNIARYLVSESVPRLIQKVKYIKE 160
           + +L F+K+V YMAK KGD GVLP+LES+G+  SS+  IARYL SE +P+LI KV ++  
Sbjct: 143 MSALSFRKKVYYMAKSKGDKGVLPYLESIGVKLSSALLIARYLSSEKLPQLIDKVNFVCG 202

Query: 159 MLYPGSDNCEYVGKNARRMMTQLSIFVDEDVQQTLSFFEKMEAKRGGLNMLG 4
           +L+P S N   +G+NARR+M  LSI  DEDVQ TLSFFEKMEA+ GGL+MLG
Sbjct: 203 ILFPSSINKALIGRNARRIMMYLSIPADEDVQSTLSFFEKMEARHGGLSMLG 254


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