BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038937
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
emb|CBI18084.3| unnamed protein product [Vitis vinifera]               73   3e-11
emb|CBI30660.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat...    69   4e-10

>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/65 (50%), Positives = 48/65 (73%)
 Frame = -3

Query: 199 MLKMYSKLGRVDQARKLFDEIPEKDLATWNSMIVGYSQNQRPAEAIELFQHMQSECKCKI 20
           ++ MY K+G +D ARK+FD++P KD+A+WN+MI G SQ+  P EA+E+FQ MQ E     
Sbjct: 168 LVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQME----E 223

Query: 19  GIKPD 5
           G++PD
Sbjct: 224 GVEPD 228


>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/66 (51%), Positives = 48/66 (72%)
 Frame = -3

Query: 199 MLKMYSKLGRVDQARKLFDEIPEKDLATWNSMIVGYSQNQRPAEAIELFQHMQSECKCKI 20
           ++ MY+K G +++AR +FD +PEKD+ +W +MI GY+ N  P EAI+LF  MQ E   K+
Sbjct: 162 LVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRE--NKL 219

Query: 19  GIKPDG 2
           GIKPDG
Sbjct: 220 GIKPDG 225


>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = -3

Query: 199 MLKMYSKLGRVDQARKLFDEIPEKDLATWNSMIVGYSQNQRPAEAIELFQHMQSECKCK 23
           ++ MYSK GR++ AR++FD +PEK++ +W SMI GY +N    EA+ELF  MQ EC  K
Sbjct: 323 LIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVK 381


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = -3

Query: 199 MLKMYSKLGRVDQARKLFDEIPEKDLATWNSMIVGYSQNQRPAEAIELFQHMQSECKCK 23
           ++ MYSK GR++ AR++FD +PEK++ +W SMI GY +N    EA+ELF  MQ EC  K
Sbjct: 323 LIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVK 381


>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = -3

Query: 199 MLKMYSKLGRVDQARKLFDEIPEKDLATWNSMIVGYSQNQRPAEAIELFQHMQSECKCKI 20
           M+ +YS  GR+D AR++FD +P K L +WNSMIVG+SQN  P EA++LF  M      K+
Sbjct: 377 MITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMN-----KL 431

Query: 19  GIKPD 5
           G++ D
Sbjct: 432 GLRMD 436