BLASTX nr result
ID: Coptis24_contig00038918
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038918 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tpg|DAA51258.1| TPA: hypothetical protein ZEAMMB73_059443 [Zea m... 72 4e-11 ref|XP_002466485.1| hypothetical protein SORBIDRAFT_01g008600 [S... 72 4e-11 ref|NP_001170385.1| uncharacterized protein LOC100384369 [Zea ma... 72 4e-11 ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis ... 70 1e-10 ref|XP_002526391.1| nucleic acid binding protein, putative [Rici... 70 1e-10 >tpg|DAA51258.1| TPA: hypothetical protein ZEAMMB73_059443 [Zea mays] Length = 763 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%) Frame = -1 Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100 LNVIRGMLQLP+ED +R R+HES + QR+ V SF ++WEPFDWTK+LD Sbjct: 716 LNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD 763 >ref|XP_002466485.1| hypothetical protein SORBIDRAFT_01g008600 [Sorghum bicolor] gi|241920339|gb|EER93483.1| hypothetical protein SORBIDRAFT_01g008600 [Sorghum bicolor] Length = 764 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%) Frame = -1 Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100 LNVIRGMLQLP+ED +R R+HES + QR+ V SF ++WEPFDWTK+LD Sbjct: 717 LNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD 764 >ref|NP_001170385.1| uncharacterized protein LOC100384369 [Zea mays] gi|224035495|gb|ACN36823.1| unknown [Zea mays] Length = 231 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%) Frame = -1 Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100 LNVIRGMLQLP+ED +R R+HES + QR+ V SF ++WEPFDWTK+LD Sbjct: 184 LNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD 231 >ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis vinifera] gi|297737179|emb|CBI26380.3| unnamed protein product [Vitis vinifera] Length = 810 Score = 70.5 bits (171), Expect = 1e-10 Identities = 31/48 (64%), Positives = 44/48 (91%), Gaps = 1/48 (2%) Frame = -1 Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100 L+VIRGML+LP+ED +R R+HES EAQ++ V++FA++WEPFDWTK+L+ Sbjct: 763 LDVIRGMLRLPEEDMHRRRRHESAEAQKQAVVNFARDWEPFDWTKQLE 810 >ref|XP_002526391.1| nucleic acid binding protein, putative [Ricinus communis] gi|223534253|gb|EEF35967.1| nucleic acid binding protein, putative [Ricinus communis] Length = 726 Score = 70.5 bits (171), Expect = 1e-10 Identities = 32/48 (66%), Positives = 41/48 (85%), Gaps = 1/48 (2%) Frame = -1 Query: 240 LNVIRGMLQLPQEDN-RLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100 LNVIRGML+LP+ED R R+HES + Q++ V +FA+EWEPFDWTK+LD Sbjct: 679 LNVIRGMLRLPEEDMYRRRRHESVDLQKQAVANFAREWEPFDWTKQLD 726