BLASTX nr result

ID: Coptis24_contig00038918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038918
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA51258.1| TPA: hypothetical protein ZEAMMB73_059443 [Zea m...    72   4e-11
ref|XP_002466485.1| hypothetical protein SORBIDRAFT_01g008600 [S...    72   4e-11
ref|NP_001170385.1| uncharacterized protein LOC100384369 [Zea ma...    72   4e-11
ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis ...    70   1e-10
ref|XP_002526391.1| nucleic acid binding protein, putative [Rici...    70   1e-10

>tpg|DAA51258.1| TPA: hypothetical protein ZEAMMB73_059443 [Zea mays]
          Length = 763

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -1

Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100
           LNVIRGMLQLP+ED +R R+HES + QR+ V SF ++WEPFDWTK+LD
Sbjct: 716 LNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD 763


>ref|XP_002466485.1| hypothetical protein SORBIDRAFT_01g008600 [Sorghum bicolor]
           gi|241920339|gb|EER93483.1| hypothetical protein
           SORBIDRAFT_01g008600 [Sorghum bicolor]
          Length = 764

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -1

Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100
           LNVIRGMLQLP+ED +R R+HES + QR+ V SF ++WEPFDWTK+LD
Sbjct: 717 LNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD 764


>ref|NP_001170385.1| uncharacterized protein LOC100384369 [Zea mays]
           gi|224035495|gb|ACN36823.1| unknown [Zea mays]
          Length = 231

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -1

Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100
           LNVIRGMLQLP+ED +R R+HES + QR+ V SF ++WEPFDWTK+LD
Sbjct: 184 LNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD 231


>ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis vinifera]
           gi|297737179|emb|CBI26380.3| unnamed protein product
           [Vitis vinifera]
          Length = 810

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/48 (64%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
 Frame = -1

Query: 240 LNVIRGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100
           L+VIRGML+LP+ED +R R+HES EAQ++ V++FA++WEPFDWTK+L+
Sbjct: 763 LDVIRGMLRLPEEDMHRRRRHESAEAQKQAVVNFARDWEPFDWTKQLE 810


>ref|XP_002526391.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534253|gb|EEF35967.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 726

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/48 (66%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -1

Query: 240 LNVIRGMLQLPQEDN-RLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 100
           LNVIRGML+LP+ED  R R+HES + Q++ V +FA+EWEPFDWTK+LD
Sbjct: 679 LNVIRGMLRLPEEDMYRRRRHESVDLQKQAVANFAREWEPFDWTKQLD 726


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