BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038801
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putati...   100   2e-19
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    93   3e-17
emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]    87   1e-15
emb|CBI31103.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
           gi|223524771|gb|EEF27701.1| NADH-ubiquinone
           oxidoreductase chain, putative [Ricinus communis]
          Length = 366

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/57 (84%), Positives = 49/57 (85%)
 Frame = -3

Query: 305 QGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSKTLPSVPKTKAP*RPGTGVGDGP 135
           QGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSK LPSVPKTK+P  P  G G  P
Sbjct: 222 QGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSKRLPSVPKTKSPLAPRDGSGGRP 278


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = -3

Query: 299 QNMCAGRATHQPTSNGGENIACRNKSLIRGVSKTLPSVPKTKAP 168
           QNMCAGRATHQPTSNGGENIACRNKSLI+GVSKTLPSVPKTKAP
Sbjct: 513 QNMCAGRATHQPTSNGGENIACRNKSLIQGVSKTLPSVPKTKAP 556


>emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]
          Length = 325

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/48 (91%), Positives = 45/48 (93%), Gaps = 2/48 (4%)
 Frame = -2

Query: 237 MSQQKLDSRRQQNTAVCSKNKSPLAPRDGSGGRPYAQ--AAPALRSQN 100
           MSQQKLDSRRQQNTAVCSKNKSPLAPRDGSGGRPYAQ  AAPALR +N
Sbjct: 1   MSQQKLDSRRQQNTAVCSKNKSPLAPRDGSGGRPYAQATAAPALRKRN 48


>emb|CBI31103.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -3

Query: 305 QGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSK 201
           QGQNMCAGRATHQPTSNG ENIACRNKSLIRGV +
Sbjct: 4   QGQNMCAGRATHQPTSNGEENIACRNKSLIRGVER 38