BLASTX nr result

ID: Coptis24_contig00038798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038798
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533623.1| conserved hypothetical protein [Ricinus comm...   214   8e-54
ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
emb|CBI37224.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246...   202   3e-50
emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]   202   3e-50

>ref|XP_002533623.1| conserved hypothetical protein [Ricinus communis]
           gi|223526481|gb|EEF28752.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 892

 Score =  214 bits (544), Expect = 8e-54
 Identities = 99/111 (89%), Positives = 106/111 (95%)
 Frame = +3

Query: 3   EVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKDDFLGRVWYDLSEV 182
           EVKLGNYRGITKK GSS+ EW QVFAFSKDCIQSS+VEIFVKE NKDDFLGRVW+DL+EV
Sbjct: 175 EVKLGNYRGITKKVGSSNMEWGQVFAFSKDCIQSSMVEIFVKEGNKDDFLGRVWFDLNEV 234

Query: 183 PKRVPPDSQLAPQWYRMEDRRGDKSKGGEVMASIWFGTQADEAFAEAWHSK 335
           P+RVPPDSQLAPQWYRMED++GDKSKGGEVM SIWFGTQADEAFAEAWHSK
Sbjct: 235 PRRVPPDSQLAPQWYRMEDKKGDKSKGGEVMVSIWFGTQADEAFAEAWHSK 285


>ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  209 bits (532), Expect = 2e-52
 Identities = 96/113 (84%), Positives = 108/113 (95%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   EVKLGNYRGITKKS-GSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKDDFLGRVWYDLSE 179
           EVKLGNYRG+TKK  GSS+ EWDQVFAFSKDCIQSS+VE+FVK+ NKDD+LGRVW+DL+E
Sbjct: 306 EVKLGNYRGVTKKVIGSSNVEWDQVFAFSKDCIQSSMVEVFVKQGNKDDYLGRVWFDLNE 365

Query: 180 VPKRVPPDSQLAPQWYRMEDRRGDKSKGGEVMASIWFGTQADEAFAEAWHSKA 338
           VP+RVPPDSQLAPQWYRMED++GDKSKGGE+M SIWFGTQADEAFAEAWHSKA
Sbjct: 366 VPRRVPPDSQLAPQWYRMEDKKGDKSKGGELMVSIWFGTQADEAFAEAWHSKA 418


>emb|CBI37224.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  202 bits (513), Expect = 3e-50
 Identities = 92/112 (82%), Positives = 104/112 (92%)
 Frame = +3

Query: 3   EVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKDDFLGRVWYDLSEV 182
           EVKLGNYRGITK+  +++PEW QVFAFSKDCIQSSV EIFVKE +KD+FLGRVW+DL+EV
Sbjct: 278 EVKLGNYRGITKRVSANNPEWGQVFAFSKDCIQSSVAEIFVKEKDKDEFLGRVWFDLNEV 337

Query: 183 PKRVPPDSQLAPQWYRMEDRRGDKSKGGEVMASIWFGTQADEAFAEAWHSKA 338
           P+RVPPDSQLA QW+RMED++GDKSK GEVM SIWFGTQADEAFAEAWHSKA
Sbjct: 338 PRRVPPDSQLASQWHRMEDKKGDKSKAGEVMVSIWFGTQADEAFAEAWHSKA 389


>ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera]
          Length = 1012

 Score =  202 bits (513), Expect = 3e-50
 Identities = 92/112 (82%), Positives = 104/112 (92%)
 Frame = +3

Query: 3   EVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKDDFLGRVWYDLSEV 182
           EVKLGNYRGITK+  +++PEW QVFAFSKDCIQSSV EIFVKE +KD+FLGRVW+DL+EV
Sbjct: 296 EVKLGNYRGITKRVSANNPEWGQVFAFSKDCIQSSVAEIFVKEKDKDEFLGRVWFDLNEV 355

Query: 183 PKRVPPDSQLAPQWYRMEDRRGDKSKGGEVMASIWFGTQADEAFAEAWHSKA 338
           P+RVPPDSQLA QW+RMED++GDKSK GEVM SIWFGTQADEAFAEAWHSKA
Sbjct: 356 PRRVPPDSQLASQWHRMEDKKGDKSKAGEVMVSIWFGTQADEAFAEAWHSKA 407


>emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]
          Length = 1012

 Score =  202 bits (513), Expect = 3e-50
 Identities = 92/112 (82%), Positives = 104/112 (92%)
 Frame = +3

Query: 3   EVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKDDFLGRVWYDLSEV 182
           EVKLGNYRGITK+  +++PEW QVFAFSKDCIQSSV EIFVKE +KD+FLGRVW+DL+EV
Sbjct: 296 EVKLGNYRGITKRVSANNPEWGQVFAFSKDCIQSSVAEIFVKEKDKDEFLGRVWFDLNEV 355

Query: 183 PKRVPPDSQLAPQWYRMEDRRGDKSKGGEVMASIWFGTQADEAFAEAWHSKA 338
           P+RVPPDSQLA QW+RMED++GDKSK GEVM SIWFGTQADEAFAEAWHSKA
Sbjct: 356 PRRVPPDSQLASQWHRMEDKKGDKSKAGEVMVSIWFGTQADEAFAEAWHSKA 407


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