BLASTX nr result

ID: Coptis24_contig00038793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038793
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523462.1| PREDICTED: uncharacterized protein LOC100817...   166   1e-39
gb|ACU18642.1| unknown [Glycine max]                                  166   1e-39
ref|XP_004140330.1| PREDICTED: uncharacterized protein LOC101220...   163   1e-38
ref|XP_003526611.1| PREDICTED: uncharacterized protein LOC100814...   161   4e-38
ref|XP_002284394.2| PREDICTED: uncharacterized protein LOC100257...   160   8e-38

>ref|XP_003523462.1| PREDICTED: uncharacterized protein LOC100817333 [Glycine max]
          Length = 426

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/121 (66%), Positives = 97/121 (80%), Gaps = 3/121 (2%)
 Frame = -2

Query: 419 FICSIGMNGSSNLCNLVPQCNVCSIIRNGFKIESEVGIYTTATSGKAHDSVRTIPEG-EK 243
           F CS+G+NGSSNLCN +PQCNVCSII++GFK+    GI TTATSGKAHD    + E  EK
Sbjct: 306 FNCSLGLNGSSNLCNSIPQCNVCSIIKHGFKVTGGAGILTTATSGKAHDKAACVEESEEK 365

Query: 242 QAMLVCRVIAGRVKRKEDAGEEDFDS--VAGAAGIYSDLDELFVSNPKSILPCFVVIYKG 69
           +AMLVCRVIAGRVK+  + G E++DS  VAGA G YS+LDEL V NPK+ILPCFVVIY+G
Sbjct: 366 RAMLVCRVIAGRVKKNAEGGMEEYDSVAVAGAVGAYSNLDELLVFNPKAILPCFVVIYRG 425

Query: 68  Y 66
           +
Sbjct: 426 F 426


>gb|ACU18642.1| unknown [Glycine max]
          Length = 426

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/121 (66%), Positives = 97/121 (80%), Gaps = 3/121 (2%)
 Frame = -2

Query: 419 FICSIGMNGSSNLCNLVPQCNVCSIIRNGFKIESEVGIYTTATSGKAHDSVRTIPEG-EK 243
           F CS+G+NGSSNLCN +PQCNVCSII++GFK+    GI TTATSGKAHD    + E  EK
Sbjct: 306 FNCSLGLNGSSNLCNSIPQCNVCSIIKHGFKVTGGAGILTTATSGKAHDKAACVEESEEK 365

Query: 242 QAMLVCRVIAGRVKRKEDAGEEDFDS--VAGAAGIYSDLDELFVSNPKSILPCFVVIYKG 69
           +AMLVCRVIAGRVK+  + G E++DS  VAGA G YS+LDEL V NPK+ILPCFVVIY+G
Sbjct: 366 RAMLVCRVIAGRVKKNAEGGMEEYDSVAVAGAVGAYSNLDELLVFNPKAILPCFVVIYRG 425

Query: 68  Y 66
           +
Sbjct: 426 F 426


>ref|XP_004140330.1| PREDICTED: uncharacterized protein LOC101220433 [Cucumis sativus]
           gi|449502470|ref|XP_004161649.1| PREDICTED:
           uncharacterized protein LOC101227125 [Cucumis sativus]
          Length = 427

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 9/125 (7%)
 Frame = -2

Query: 413 CSIGMNGSSNLCNLVPQCNVCSIIRNGFKIESEV-------GIYTTATSGKAHDSVRTIP 255
           CS+G NGSSNLC+ +PQCNVCSII+NGFK+ +E        GI TTATSGKAHDSV    
Sbjct: 303 CSLGFNGSSNLCSSIPQCNVCSIIKNGFKMAAEATGGDAGKGILTTATSGKAHDSVGVSS 362

Query: 254 EG--EKQAMLVCRVIAGRVKRKEDAGEEDFDSVAGAAGIYSDLDELFVSNPKSILPCFVV 81
           +G   K+AMLVCRVIAGRVK+  +   ED+DS+AGAAG+YS+LDEL+V +PK+ILPCFVV
Sbjct: 363 DGGNNKRAMLVCRVIAGRVKKSSEGSMEDYDSLAGAAGMYSNLDELYVFSPKAILPCFVV 422

Query: 80  IYKGY 66
           IY G+
Sbjct: 423 IYGGF 427


>ref|XP_003526611.1| PREDICTED: uncharacterized protein LOC100814186 [Glycine max]
          Length = 423

 Score =  161 bits (408), Expect = 4e-38
 Identities = 81/122 (66%), Positives = 97/122 (79%), Gaps = 4/122 (3%)
 Frame = -2

Query: 419 FICSIGMNGSSNLCNLVPQCNVCSIIRNGFKIESE-VGIYTTATSGKAHDSVRTIPEGE- 246
           F CS+G+NGSSNLCN +PQCNVCSII++GFK+     GI TTATSGKAHD    + E E 
Sbjct: 302 FNCSLGLNGSSNLCNSIPQCNVCSIIKHGFKVTGGGAGILTTATSGKAHDKAACVDESEE 361

Query: 245 KQAMLVCRVIAGRVKRK--EDAGEEDFDSVAGAAGIYSDLDELFVSNPKSILPCFVVIYK 72
           K+AMLVCRVIAGRVK+   E  G E++DSVA A G YS+LDEL VSNP++ILPCFVVIY+
Sbjct: 362 KRAMLVCRVIAGRVKKNIAEGGGMEEYDSVAAAVGAYSNLDELVVSNPRAILPCFVVIYR 421

Query: 71  GY 66
           G+
Sbjct: 422 GF 423


>ref|XP_002284394.2| PREDICTED: uncharacterized protein LOC100257501 [Vitis vinifera]
          Length = 420

 Score =  160 bits (406), Expect = 8e-38
 Identities = 83/125 (66%), Positives = 100/125 (80%), Gaps = 10/125 (8%)
 Frame = -2

Query: 419 FICSIGMNGSSNLCNLVPQCNVCSIIRNGFKIESEV---GIYTTATSGKAHDSVR-TIPE 252
           F+CSIG+NGSSNLCN +P C++CSII+NGFK+   V   GI TTATSGKAHDS R ++P+
Sbjct: 293 FVCSIGLNGSSNLCNSIPSCSICSIIKNGFKVAGGVPGKGILTTATSGKAHDSSRMSLPD 352

Query: 251 -GEKQAMLVCRVIAGRVKRKEDAGE-----EDFDSVAGAAGIYSDLDELFVSNPKSILPC 90
             EK+AMLVCRVIAGRVK+     E     E+FDSVAG  G+YS+LDEL+VSNPK+ILPC
Sbjct: 353 DNEKRAMLVCRVIAGRVKKSATQLEGGVCTEEFDSVAGVGGVYSNLDELYVSNPKAILPC 412

Query: 89  FVVIY 75
           FVVIY
Sbjct: 413 FVVIY 417


Top