BLASTX nr result
ID: Coptis24_contig00038755
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038755 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516624.1| conserved hypothetical protein [Ricinus comm... 82 3e-27 ref|XP_002333493.1| predicted protein [Populus trichocarpa] gi|2... 115 3e-24 ref|YP_006280930.1| NADH dehydrogenase subunit 7 (mitochondrion)... 97 1e-18 ref|YP_005090366.1| NADH dehydrogenase subunit 7 (mitochondrion)... 97 1e-18 emb|CBI31099.3| unnamed protein product [Vitis vinifera] 96 3e-18 >ref|XP_002516624.1| conserved hypothetical protein [Ricinus communis] gi|223544226|gb|EEF45748.1| conserved hypothetical protein [Ricinus communis] Length = 90 Score = 81.6 bits (200), Expect(2) = 3e-27 Identities = 38/54 (70%), Positives = 44/54 (81%) Frame = -3 Query: 222 ITPVQHEATDAKSAPMPLAMPCLVPRRGGGSVARHEHGAAGRLSNSSEPPYLTT 61 + ++HEA D +SAPMPLAMP LVPR GGGSVARH+H A GR SNSS+ PYLTT Sbjct: 36 VVELRHEAADVESAPMPLAMPYLVPRHGGGSVARHQHRAKGRWSNSSKLPYLTT 89 Score = 65.5 bits (158), Expect(2) = 3e-27 Identities = 31/38 (81%), Positives = 32/38 (84%) Frame = -1 Query: 356 MTTRNGQIKNFTLNSGPQHPAAHGVSRSILEMNREVVE 243 MTTRNG+IKNFTLN PQHP HGVSRS LEMN EVVE Sbjct: 1 MTTRNGKIKNFTLNFKPQHPTTHGVSRSALEMNGEVVE 38 >ref|XP_002333493.1| predicted protein [Populus trichocarpa] gi|222837062|gb|EEE75441.1| predicted protein [Populus trichocarpa] Length = 62 Score = 115 bits (289), Expect = 3e-24 Identities = 54/62 (87%), Positives = 57/62 (91%) Frame = -1 Query: 356 MTTRNGQIKNFTLNSGPQHPAAHGVSRSILEMNREVVERAEPHIGSLQCSTKPLTPSRLL 177 MTT+NGQIKNFT N GPQHPAAHGVSRS+LEMN EVVERA+PHIG LQC TKPLTPSRLL Sbjct: 1 MTTKNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERADPHIGLLQCGTKPLTPSRLL 60 Query: 176 CR 171 CR Sbjct: 61 CR 62 >ref|YP_006280930.1| NADH dehydrogenase subunit 7 (mitochondrion) [Spirodela polyrhiza] gi|385252632|gb|AFI54940.1| NADH dehydrogenase subunit 7 (mitochondrion) [Spirodela polyrhiza] Length = 375 Score = 97.4 bits (241), Expect = 1e-18 Identities = 46/52 (88%), Positives = 47/52 (90%) Frame = -1 Query: 356 MTTRNGQIKNFTLNSGPQHPAAHGVSRSILEMNREVVERAEPHIGSLQCSTK 201 MTTRNGQIKNFT NSGPQHPAAHGVSR +LEMN EVVERAEPHIG LQC TK Sbjct: 1 MTTRNGQIKNFTSNSGPQHPAAHGVSRLVLEMNGEVVERAEPHIGLLQCGTK 52 >ref|YP_005090366.1| NADH dehydrogenase subunit 7 (mitochondrion) [Phoenix dactylifera] gi|343478419|gb|AEM43907.1| NADH dehydrogenase subunit 7 (mitochondrion) [Phoenix dactylifera] Length = 394 Score = 97.1 bits (240), Expect = 1e-18 Identities = 47/54 (87%), Positives = 49/54 (90%) Frame = -1 Query: 356 MTTRNGQIKNFTLNSGPQHPAAHGVSRSILEMNREVVERAEPHIGSLQCSTKPL 195 MTTRNGQIKNFT NSGPQHPAAHGVSRS+LEMN EVVERAEPHIGSLQ T+ L Sbjct: 1 MTTRNGQIKNFTSNSGPQHPAAHGVSRSVLEMNGEVVERAEPHIGSLQRGTEKL 54 >emb|CBI31099.3| unnamed protein product [Vitis vinifera] Length = 385 Score = 95.9 bits (237), Expect = 3e-18 Identities = 55/106 (51%), Positives = 66/106 (62%) Frame = -1 Query: 356 MTTRNGQIKNFTLNSGPQHPAAHGVSRSILEMNREVVERAEPHIGSLQCSTKPLTPSRLL 177 MTTRNGQI NFT NSGPQHPAAHGVSRS+LEMN EVVERAEPHIGSLQ + K + Sbjct: 1 MTTRNGQITNFTSNSGPQHPAAHGVSRSVLEMNGEVVERAEPHIGSLQGTEKLI------ 54 Query: 176 CR*LCPAWSPGVVEVP*HVMSTGQRGG*ATQANRPILLLNRDRREK 39 + + +P S G RG ++AN P+ L +E+ Sbjct: 55 ------EYKTYLQALPYSDRSEGDRGEITSRANDPLRLTECTGKER 94