BLASTX nr result

ID: Coptis24_contig00038741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038741
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556931.1| PREDICTED: heat stress transcription factor ...    96   2e-18
gb|ACU21168.1| unknown [Glycine max]                                   96   4e-18
ref|XP_002265293.1| PREDICTED: heat stress transcription factor ...    95   7e-18
ref|XP_003529498.1| PREDICTED: LOW QUALITY PROTEIN: heat stress ...    92   6e-17
ref|XP_002298460.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>ref|XP_003556931.1| PREDICTED: heat stress transcription factor B-4-like [Glycine max]
          Length = 271

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   RLRRKNFMLLSELSHMKKLYNDIIYFLQNNVKAIPIDQRWMITQGPKLIESKPL-QSHSF 178
           RLRRKNFMLLSELSHMK LYNDIIYF+QN+VK  P +QR   +  P L+E   L +S + 
Sbjct: 166 RLRRKNFMLLSELSHMKSLYNDIIYFIQNHVKPPPFEQR-SSSVIPNLVELDSLHESPND 224

Query: 179 FG-NDSYKPCSSSSGSMALTEESDNTIKLFGVPLCGKKRLYHD 304
            G   S K C      +  TEES++++KLFG PL G+KRL+ D
Sbjct: 225 MGVRRSAKSCVVDKSLITSTEESNSSVKLFGFPLSGRKRLHPD 267


>gb|ACU21168.1| unknown [Glycine max]
          Length = 271

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   RLRRKNFMLLSELSHMKKLYNDIIYFLQNNVKAIPIDQRWMITQGPKLIESKPL-QSHSF 178
           RLRRKNFMLLSELSHMK LYNDIIYF+QN+VK  P +QR   +  P L+E   L +S + 
Sbjct: 166 RLRRKNFMLLSELSHMKSLYNDIIYFIQNHVKPPPFEQR-SSSVIPNLVELDLLHESPND 224

Query: 179 FG-NDSYKPCSSSSGSMALTEESDNTIKLFGVPLCGKKRLYHD 304
            G   S K C      +  TEES++++KLFG PL G+KRL+ D
Sbjct: 225 MGVRRSAKSCVVDKSLITSTEESNSSVKLFGFPLSGRKRLHPD 267


>ref|XP_002265293.1| PREDICTED: heat stress transcription factor B-4 [Vitis vinifera]
           gi|296083885|emb|CBI24273.3| unnamed protein product
           [Vitis vinifera]
          Length = 285

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 7/114 (6%)
 Frame = +2

Query: 2   RLRRKNFMLLSELSHMKKLYNDIIYFLQNNVKAI-PIDQRWMITQGPKLIE-SKPLQSHS 175
           RLRRKNFMLLSEL+HMK LYNDII+F+QN+VK + P DQR      PKLIE    LQS +
Sbjct: 167 RLRRKNFMLLSELAHMKTLYNDIIFFIQNHVKPVAPYDQRPKSNAAPKLIELDSSLQSPN 226

Query: 176 FFGNDS----YKPCSSSSGSMALTEESDN-TIKLFGVPLCGKKRLYHDRIEDKE 322
             G  +    Y   + S  ++   ++++N + KLFGVPL GKKRL+ ++ + +E
Sbjct: 227 VSGMQTPKHRYSAGNCSMSTLTDDQQTNNGSFKLFGVPLSGKKRLHPEKFDPEE 280


>ref|XP_003529498.1| PREDICTED: LOW QUALITY PROTEIN: heat stress transcription factor
           B-4b-like [Glycine max]
          Length = 270

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
 Frame = +2

Query: 5   LRRKNFMLLSELSHMKKLYNDIIYFLQNNVKAIPIDQRWMITQGPKLIESKPLQSHSFFG 184
           LRRKNFMLLSELSHMK LYNDIIYF+QN+VK+ P +QR   +  PKL+E   L       
Sbjct: 167 LRRKNFMLLSELSHMKSLYNDIIYFIQNHVKSPPFEQR-SSSVIPKLVELDSLHESP--- 222

Query: 185 ND-----SYKPCSSSSGSMALTEESDNTIKLFGVPLCGKKRLYHD 304
           ND     + K C      +  TEES++++KLFGV L G+ RL+ D
Sbjct: 223 NDMGVLRTAKSCVVDKSLVTSTEESNSSVKLFGVTLSGRXRLHPD 267


>ref|XP_002298460.1| predicted protein [Populus trichocarpa] gi|222845718|gb|EEE83265.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
 Frame = +2

Query: 2   RLRRKNFMLLSELSHMKKLYNDIIYFLQNNVKAIPIDQRWMITQGPKLIE-SKPLQSHSF 178
           RLRRKN MLLSELSHMK LYNDIIYF+QN+VK +P +Q+      PKLIE     Q  + 
Sbjct: 164 RLRRKNCMLLSELSHMKNLYNDIIYFIQNHVKPMPYEQK-AYNAAPKLIELGSSCQDQTI 222

Query: 179 FGNDSYKPCSSSSGSMAL---TEESDNTIKLFGVPLCGKKRLYHDRIE 313
             +       +  G  +L   TEES + +KLFGVPL G KRL+ + I+
Sbjct: 223 CSSIQRAKNGTVLGQHSLTLSTEESTSPVKLFGVPLSGNKRLHPEVID 270


Top