BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038740
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330363.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
emb|CBI26082.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11

>ref|XP_002330363.1| predicted protein [Populus trichocarpa] gi|222871567|gb|EEF08698.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +1

Query: 88  KSGFLNHTITANHLLNAYVRLENIKDAQNLFDEMHDPNVVSWTSLMSGYI 237
           K G LN TIT NHLLN+Y+R   I+ A +LFDEMH+PNVVSWTSLMSGY+
Sbjct: 34  KFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNVVSWTSLMSGYV 83


>ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g15720-like [Cucumis sativus]
          Length = 603

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = +1

Query: 82  SVKSGFLNHTITANHLLNAYVRLENIKDAQNLFDEMHDPNVVSWTSLMSGYI 237
           ++K GFLN+T+  NHL+N YVR  +I  A  LFDEM +PNVVSWTSLM+GY+
Sbjct: 50  ALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYV 101


>ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g15720-like [Cucumis sativus]
          Length = 603

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = +1

Query: 82  SVKSGFLNHTITANHLLNAYVRLENIKDAQNLFDEMHDPNVVSWTSLMSGYI 237
           ++K GFLN+T+  NHL+N YVR  +I  A  LFDEM +PNVVSWTSLM+GY+
Sbjct: 50  ALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYV 101


>emb|CBI26082.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = +1

Query: 85  VKSGFLNHTITANHLLNAYVRLENIKDAQNLFDEMHDPNVVSWTSLMSGYI 237
           +KSGFLN T T NHL+N+YVR+    DA  LF+EM +PNV+S+TSLM+G+I
Sbjct: 54  LKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFI 104


>ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g15720-like [Vitis vinifera]
          Length = 606

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = +1

Query: 85  VKSGFLNHTITANHLLNAYVRLENIKDAQNLFDEMHDPNVVSWTSLMSGYI 237
           +KSGFLN T T NHL+N+YVR+    DA  LF+EM +PNV+S+TSLM+G+I
Sbjct: 54  LKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFI 104