BLASTX nr result
ID: Coptis24_contig00038734
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038734 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot... 203 1e-50 ref|XP_003636017.1| DNA repair and recombination protein RAD54-l... 197 7e-49 ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot... 197 1e-48 ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot... 197 1e-48 emb|CBI32424.3| unnamed protein product [Vitis vinifera] 197 1e-48 >ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine max] Length = 894 Score = 203 bits (517), Expect = 1e-50 Identities = 96/99 (96%), Positives = 98/99 (98%) Frame = -3 Query: 297 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNCFNDPSKDEFAFLLSSKAGGCGLNLI 118 QTLDLFAQLCRERRYP+LRLDG+TSISKRQKLVNCFNDPSKDEF FLLSSKAGGCGLNLI Sbjct: 554 QTLDLFAQLCRERRYPHLRLDGSTSISKRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLI 613 Query: 117 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 1 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL Sbjct: 614 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 652 >ref|XP_003636017.1| DNA repair and recombination protein RAD54-like protein [Medicago truncatula] gi|355501952|gb|AES83155.1| DNA repair and recombination protein RAD54-like protein [Medicago truncatula] Length = 1004 Score = 197 bits (501), Expect = 7e-49 Identities = 93/99 (93%), Positives = 95/99 (95%) Frame = -3 Query: 297 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNCFNDPSKDEFAFLLSSKAGGCGLNLI 118 QTLDLFAQLCRER+YP+LRLDG TSISKRQKLVNC NDPSKDEF FLLSSKAGGCGLNLI Sbjct: 566 QTLDLFAQLCRERKYPHLRLDGATSISKRQKLVNCLNDPSKDEFVFLLSSKAGGCGLNLI 625 Query: 117 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 1 G NRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL Sbjct: 626 GANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 664 >ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis sativus] Length = 928 Score = 197 bits (500), Expect = 1e-48 Identities = 95/99 (95%), Positives = 96/99 (96%) Frame = -3 Query: 297 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNCFNDPSKDEFAFLLSSKAGGCGLNLI 118 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN FND SKDEF FLLSSKAGGCGLNLI Sbjct: 563 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDLSKDEFVFLLSSKAGGCGLNLI 622 Query: 117 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 1 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV+IYRFL Sbjct: 623 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFL 661 >ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis vinifera] Length = 934 Score = 197 bits (500), Expect = 1e-48 Identities = 94/99 (94%), Positives = 96/99 (96%) Frame = -3 Query: 297 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNCFNDPSKDEFAFLLSSKAGGCGLNLI 118 QTLDLFAQLCRERRYPYLRLDGTTSI+KRQKLVN F+DP KDEF FLLSSKAGGCGLNLI Sbjct: 564 QTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLI 623 Query: 117 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 1 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL Sbjct: 624 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 662 >emb|CBI32424.3| unnamed protein product [Vitis vinifera] Length = 1112 Score = 197 bits (500), Expect = 1e-48 Identities = 94/99 (94%), Positives = 96/99 (96%) Frame = -3 Query: 297 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNCFNDPSKDEFAFLLSSKAGGCGLNLI 118 QTLDLFAQLCRERRYPYLRLDGTTSI+KRQKLVN F+DP KDEF FLLSSKAGGCGLNLI Sbjct: 742 QTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLI 801 Query: 117 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 1 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL Sbjct: 802 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 840