BLASTX nr result
ID: Coptis24_contig00038713
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038713 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96779.1| unknown [Populus trichocarpa x Populus deltoides] 66 3e-09 gb|AFH03056.1| R2R3-MYB transcription factor MYB4 [Epimedium sag... 64 1e-08 ref|XP_002319734.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 dbj|BAJ61428.1| R2R3-MYB transcription factor [Lupinus albus] 57 2e-06 gb|ADL36762.1| MYB domain class transcription factor [Malus x do... 55 6e-06 >gb|ABK96779.1| unknown [Populus trichocarpa x Populus deltoides] Length = 240 Score = 66.2 bits (160), Expect = 3e-09 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 7/97 (7%) Frame = -2 Query: 271 NQISIFRLNQTSTYASSTENISKMLEGWMKASSPKARSEEKQSVNNSKNEINYSNTMINN 92 N S R NQ STYASSTENIS++LEGWM+ SSPK S N + E NN Sbjct: 67 NSSSALRPNQASTYASSTENISRLLEGWMR-SSPKPNSSNFLLKENREQE--------NN 117 Query: 91 NKDNDEYTISSQC------NHVEKAAQEHG-LISHEE 2 +++N+++ I++ ++ EK QE G LISHEE Sbjct: 118 SQENNDHDIANSVAINYLQSYKEKPEQERGDLISHEE 154 >gb|AFH03056.1| R2R3-MYB transcription factor MYB4 [Epimedium sagittatum] Length = 355 Score = 64.3 bits (155), Expect = 1e-08 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%) Frame = -2 Query: 298 TDKRSKEMMNQISIFRLNQTSTYASSTENISKMLEGWMKASSPKARSEEKQSVNNSKNEI 119 TD+RS+++ N S RLNQTSTYASSTE+IS+ LEGWM S N N Sbjct: 158 TDERSQDLANSASRLRLNQTSTYASSTESISRRLEGWM-------------STCNRNN-- 202 Query: 118 NYSNTMINNNKDNDEYTISSQCNHV---EKAAQEHGLISHEE 2 N+S+ +N+ + T S QC + + + + LISHE+ Sbjct: 203 NHSSRSTSNSNNIAVGTSSHQCEELVEDDTELESYDLISHED 244 >ref|XP_002319734.1| predicted protein [Populus trichocarpa] gi|222858110|gb|EEE95657.1| predicted protein [Populus trichocarpa] Length = 323 Score = 58.9 bits (141), Expect = 4e-07 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Frame = -2 Query: 253 RLNQTSTYASSTENISKMLEGWMKASSPKARSEEKQSVNNSKNEINYSNTMINNNKDNDE 74 R NQ STYASSTENIS++LEGWM+ SSPK + N KN + N N + + Sbjct: 158 RPNQVSTYASSTENISRLLEGWMR-SSPKPNGTDLLKENWEKNNNSLEN---NGHSFGNS 213 Query: 73 YTISSQCNHVEKAAQEHG-LISHEE 2 +S ++ K +E G LISHEE Sbjct: 214 VATNSLQSYRPKPEEESGDLISHEE 238 >dbj|BAJ61428.1| R2R3-MYB transcription factor [Lupinus albus] Length = 278 Score = 56.6 bits (135), Expect = 2e-06 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%) Frame = -2 Query: 244 QTSTYASSTENISKMLEGWMKASSPKARSEEKQSVNNSKNEINYSNTMINNNKDNDEYTI 65 Q+STYASSTENIS++L+GWM+ SSPK +E Q + E + + N+ +N + Sbjct: 111 QSSTYASSTENISRLLQGWMR-SSPKEPLKETQEDGEEEEEEEFQS---NDEFENSNNVV 166 Query: 64 SS---------QCNHVEKAAQEHGLISHEE 2 S Q K EH ++SHEE Sbjct: 167 KSASVPAGLNFQLQQQYKTKDEHDMVSHEE 196 >gb|ADL36762.1| MYB domain class transcription factor [Malus x domestica] Length = 374 Score = 55.1 bits (131), Expect = 6e-06 Identities = 29/59 (49%), Positives = 39/59 (66%) Frame = -2 Query: 253 RLNQTSTYASSTENISKMLEGWMKASSPKARSEEKQSVNNSKNEINYSNTMINNNKDND 77 R + TSTYAS+TENI+K+LE WMK +SPK + + S + ++ N N NNN DND Sbjct: 207 RPHHTSTYASNTENIAKLLENWMK-NSPKVSAHQTNSDQTNADQTNSFNN--NNNNDND 262