BLASTX nr result

ID: Coptis24_contig00038706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038706
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298558.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
gb|AFK39676.1| unknown [Lotus japonicus]                               90   2e-16
ref|XP_002321647.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_003622327.1| hypothetical protein MTR_7g033080 [Medicago ...    72   4e-11
ref|XP_002526973.1| conserved hypothetical protein [Ricinus comm...    72   6e-11

>ref|XP_002298558.1| predicted protein [Populus trichocarpa] gi|222845816|gb|EEE83363.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/104 (49%), Positives = 67/104 (64%)
 Frame = +1

Query: 4   YQRLRNEGWYEEGEEHKQDAIVIKRTRSWSKNFXXXXXXXXXXXXXPGLRRFLRKKAKLF 183
           Y +L++EG+ +E EE  +  IV  ++R W   F             P L RFLR++ KL 
Sbjct: 9   YHKLKHEGFCDEYEERHRFNIV--KSRRWY-GFRRVHIRKRFRLKVPSLGRFLRRRVKLV 65

Query: 184 SAVRLSYNKVIRRFVEGRSHLGDLFAGNYLFMQVSPTPLKCRDR 315
           SAVRLS  KV++R  EG++H GDLFAGNYLFMQV+PTPLK  +R
Sbjct: 66  SAVRLSCAKVLKRLKEGQAHFGDLFAGNYLFMQVNPTPLKYFER 109


>gb|AFK39676.1| unknown [Lotus japonicus]
          Length = 122

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +1

Query: 4   YQRLRNEGWYEEGEEHKQDAIVIKRTRSWSK-NFXXXXXXXXXXXXXPGLRRFLRKKAKL 180
           YQRL++EG YE     ++D ++I+R +SW +  F             P L+R  RK+ +L
Sbjct: 14  YQRLKHEGGYEI----ERDRVLIQRPKSWFRFRFRRIQIRRRFRLKIPSLKRLWRKRVRL 69

Query: 181 FSAVRLSYNKVIRRFVEGRSHLGDLFAGNYLFMQVSPTPLKCRDRK 318
            S++RLSY KV++RF + + H GDLFAGNYLFMQV+P+ LK  +++
Sbjct: 70  VSSMRLSYAKVLKRFKDNKVHFGDLFAGNYLFMQVNPSSLKYLEKE 115


>ref|XP_002321647.1| predicted protein [Populus trichocarpa] gi|222868643|gb|EEF05774.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/105 (40%), Positives = 64/105 (60%)
 Frame = +1

Query: 4   YQRLRNEGWYEEGEEHKQDAIVIKRTRSWSKNFXXXXXXXXXXXXXPGLRRFLRKKAKLF 183
           Y RL +EGW +E  E ++    ++R R++ +               PGLRRFLRK+A+LF
Sbjct: 10  YYRLGHEGWLDEEAEEER---ALRRVRNFPR-LKKFTITKRLRLRVPGLRRFLRKRARLF 65

Query: 184 SAVRLSYNKVIRRFVEGRSHLGDLFAGNYLFMQVSPTPLKCRDRK 318
           S V++S+ K  +R   G++H+ DLF GN+L MQV+  P KC +R+
Sbjct: 66  SRVKVSWLKAWKRLKNGQAHINDLFGGNFLVMQVNRAPFKCGERR 110


>ref|XP_003622327.1| hypothetical protein MTR_7g033080 [Medicago truncatula]
           gi|355497342|gb|AES78545.1| hypothetical protein
           MTR_7g033080 [Medicago truncatula]
          Length = 117

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/99 (42%), Positives = 60/99 (60%)
 Frame = +1

Query: 4   YQRLRNEGWYEEGEEHKQDAIVIKRTRSWSKNFXXXXXXXXXXXXXPGLRRFLRKKAKLF 183
           YQ+LR+E   +       D  VI+R +++ + F             P LRR  RKK K+ 
Sbjct: 14  YQKLRHEVVLD-------DERVIQRPKNFFR-FRRIPMRRRFRLKIPSLRRLWRKKTKVV 65

Query: 184 SAVRLSYNKVIRRFVEGRSHLGDLFAGNYLFMQVSPTPL 300
           S++R+S  KV++RF +G+ H GDLFAGNYLFMQV+P+ L
Sbjct: 66  SSMRVSCAKVVKRFKDGQVHFGDLFAGNYLFMQVNPSSL 104


>ref|XP_002526973.1| conserved hypothetical protein [Ricinus communis]
           gi|223533725|gb|EEF35460.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/101 (41%), Positives = 58/101 (57%)
 Frame = +1

Query: 1   SYQRLRNEGWYEEGEEHKQDAIVIKRTRSWSKNFXXXXXXXXXXXXXPGLRRFLRKKAKL 180
           SYQRL NE    + E  ++   V + +RSW +                 +RRFLR+K  L
Sbjct: 8   SYQRLNNEDILGDCEGTERQ--VARSSRSWQRYRRVHPRKRFRLKVPSLMRRFLRRKVNL 65

Query: 181 FSAVRLSYNKVIRRFVEGRSHLGDLFAGNYLFMQVSPTPLK 303
             A   +Y KV++R  +G++H GDLFAGNYLF+QV+PT LK
Sbjct: 66  VYA---AYAKVLKRLKDGQAHFGDLFAGNYLFLQVNPTSLK 103


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