BLASTX nr result

ID: Coptis24_contig00038701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038701
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513301.1| ATP binding protein, putative [Ricinus commu...    68   7e-10
ref|XP_002452944.1| hypothetical protein SORBIDRAFT_04g035360 [S...    66   3e-09
gb|AAV64214.1| stk [Zea mays]                                          60   2e-07
ref|XP_002437997.1| hypothetical protein SORBIDRAFT_10g006130 [S...    60   2e-07
gb|ACR38284.1| unknown [Zea mays]                                      60   2e-07

>ref|XP_002513301.1| ATP binding protein, putative [Ricinus communis]
           gi|223547209|gb|EEF48704.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 786

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/96 (39%), Positives = 48/96 (50%)
 Frame = +2

Query: 2   TMDMYSTACKEALTAKQKAMELHRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           TMDMYSTACKEALTAKQKA+ELHRW++                                 
Sbjct: 337 TMDMYSTACKEALTAKQKAVELHRWRVEEERRMEEAKLAEEAALSAVQKEKARCRAAMEA 396

Query: 182 XXXXXXXXXXXXQKRINAEMKALRESQEKLKVLDAL 289
                       QKR+N E++AL+E++E  KV+DAL
Sbjct: 397 AEAAKKIAELEAQKRLNVELRALKEAEEMKKVMDAL 432


>ref|XP_002452944.1| hypothetical protein SORBIDRAFT_04g035360 [Sorghum bicolor]
           gi|241932775|gb|EES05920.1| hypothetical protein
           SORBIDRAFT_04g035360 [Sorghum bicolor]
          Length = 781

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/95 (41%), Positives = 47/95 (49%)
 Frame = +2

Query: 2   TMDMYSTACKEALTAKQKAMELHRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           TMDMYSTACKEAL+AKQKAMEL RWKM                                 
Sbjct: 325 TMDMYSTACKEALSAKQKAMELQRWKMDEEQRSQETRLTEESAMALIEQEKAKARAAIEA 384

Query: 182 XXXXXXXXXXXXQKRINAEMKALRESQEKLKVLDA 286
                       QKRI+AEMKAL+E++E+L+ + A
Sbjct: 385 AEAAQRLADFEAQKRISAEMKALKEAEERLRSMAA 419


>gb|AAV64214.1| stk [Zea mays]
          Length = 767

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/89 (40%), Positives = 41/89 (46%)
 Frame = +2

Query: 2   TMDMYSTACKEALTAKQKAMELHRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           TMDMYSTACKEALTAKQKAMEL RWKM                                 
Sbjct: 333 TMDMYSTACKEALTAKQKAMELQRWKMEEEQKTQDSRITEDSAMAMIEREKARAKAAMEA 392

Query: 182 XXXXXXXXXXXXQKRINAEMKALRESQEK 268
                       QKRI+AE K L+E++E+
Sbjct: 393 AEASQRIAEMEVQKRISAEKKLLKEAEER 421


>ref|XP_002437997.1| hypothetical protein SORBIDRAFT_10g006130 [Sorghum bicolor]
           gi|241916220|gb|EER89364.1| hypothetical protein
           SORBIDRAFT_10g006130 [Sorghum bicolor]
          Length = 796

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/89 (40%), Positives = 41/89 (46%)
 Frame = +2

Query: 2   TMDMYSTACKEALTAKQKAMELHRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           TMDMYSTACKEALTAKQKAMEL RWKM                                 
Sbjct: 339 TMDMYSTACKEALTAKQKAMELQRWKMEEEQKTQDSRITEDSAMAMIEREKAKAKAAMEA 398

Query: 182 XXXXXXXXXXXXQKRINAEMKALRESQEK 268
                       QKRI+AE K L+E++E+
Sbjct: 399 AEASQRIAEMEVQKRISAEKKLLKEAEER 427


>gb|ACR38284.1| unknown [Zea mays]
          Length = 520

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/89 (40%), Positives = 41/89 (46%)
 Frame = +2

Query: 2   TMDMYSTACKEALTAKQKAMELHRWKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           TMDMYSTACKEALTAKQKAMEL RWKM                                 
Sbjct: 66  TMDMYSTACKEALTAKQKAMELQRWKMEEEQKTQDSRITEDSAMAMIEREKARAKAAMEA 125

Query: 182 XXXXXXXXXXXXQKRINAEMKALRESQEK 268
                       QKRI+AE K L+E++E+
Sbjct: 126 AEASQRIAEMEVQKRISAEKKLLKEAEER 154


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