BLASTX nr result

ID: Coptis24_contig00038687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038687
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39293.1| unknown [Lotus japonicus]                               81   1e-13
ref|XP_002522076.1| Xyloglucan endotransglucosylase/hydrolase pr...    81   1e-13
ref|XP_003535672.1| PREDICTED: probable xyloglucan endotransgluc...    80   1e-13
ref|XP_004150273.1| PREDICTED: probable xyloglucan endotransgluc...    79   3e-13
emb|CBI25107.3| unnamed protein product [Vitis vinifera]               77   1e-12

>gb|AFK39293.1| unknown [Lotus japonicus]
          Length = 295

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/53 (67%), Positives = 43/53 (81%)
 Frame = +2

Query: 17  VIVIIGFLIANFIQVSYSSVVSVGDFNKDFFVTWAPTHINTSADGHERSLKLD 175
           +I  +GF+  N  QVS +SVVS GDFNKDFFV W+PTH+NTSADGH R+LKLD
Sbjct: 8   LIFFLGFVSFNLFQVSVASVVSTGDFNKDFFVIWSPTHVNTSADGHTRTLKLD 60


>ref|XP_002522076.1| Xyloglucan endotransglucosylase/hydrolase protein A precursor,
           putative [Ricinus communis] gi|223538675|gb|EEF40276.1|
           Xyloglucan endotransglucosylase/hydrolase protein A
           precursor, putative [Ricinus communis]
          Length = 294

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/57 (64%), Positives = 46/57 (80%)
 Frame = +2

Query: 5   NKDKVIVIIGFLIANFIQVSYSSVVSVGDFNKDFFVTWAPTHINTSADGHERSLKLD 175
           N  K IV I  ++A+  Q+S+SSVVS GDFNKDFFV+W+P+HINTSADG  RSL+LD
Sbjct: 3   NMFKFIVFIELILASLFQISFSSVVSTGDFNKDFFVSWSPSHINTSADGRTRSLELD 59


>ref|XP_003535672.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 10-like [Glycine max]
          Length = 296

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/53 (66%), Positives = 44/53 (83%)
 Frame = +2

Query: 17  VIVIIGFLIANFIQVSYSSVVSVGDFNKDFFVTWAPTHINTSADGHERSLKLD 175
           +I  IGF+ ++  QVS +S+VS GDFNKDFF+ W+PTH+NTSADGH RSLKLD
Sbjct: 9   LIFFIGFVSSSLFQVSVASIVSTGDFNKDFFLIWSPTHVNTSADGHARSLKLD 61


>ref|XP_004150273.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 10-like [Cucumis sativus]
           gi|449533605|ref|XP_004173764.1| PREDICTED: probable
           xyloglucan endotransglucosylase/hydrolase protein
           10-like [Cucumis sativus]
          Length = 308

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 30/53 (56%), Positives = 45/53 (84%)
 Frame = +2

Query: 17  VIVIIGFLIANFIQVSYSSVVSVGDFNKDFFVTWAPTHINTSADGHERSLKLD 175
           +++  G  I+NF+Q+SY+S++S GD+NKDFF+TW+P+H+NTS DG  R+LKLD
Sbjct: 21  IMIFFGVFISNFLQLSYASLISTGDYNKDFFITWSPSHVNTSLDGRARNLKLD 73


>emb|CBI25107.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/55 (65%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +2

Query: 14  KVIVIIGFL-IANFIQVSYSSVVSVGDFNKDFFVTWAPTHINTSADGHERSLKLD 175
           K++  IG L + + +QVS +SVVS GDFNKDFFV W+P+H+NTSADGH RSLKLD
Sbjct: 6   KLVFFIGVLTLISLVQVSDASVVSTGDFNKDFFVIWSPSHVNTSADGHARSLKLD 60


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