BLASTX nr result

ID: Coptis24_contig00038681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038681
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002513451.1| transcription factor, putative [Ricinus comm...   118   6e-25
ref|XP_003539056.1| PREDICTED: lysine-specific demethylase 8-lik...   116   2e-24
ref|XP_004154619.1| PREDICTED: lysine-specific demethylase 8-lik...   113   1e-23
ref|XP_003539394.1| PREDICTED: lysine-specific demethylase 8-lik...   112   2e-23

>ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|222846502|gb|EEE84049.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  119 bits (298), Expect = 3e-25
 Identities = 51/80 (63%), Positives = 66/80 (82%)
 Frame = -3

Query: 267 WEQLHSGPWHSVLPVWRDAYSMSCLQVASFYYRNGNFKEALKVLDMGVIMGGVLLRDDLD 88
           WEQLHSGPWHSVLP WRDAYSM+CL VA F+YRNG FKE+L+VLD+G+IMGGVLL+ DL+
Sbjct: 61  WEQLHSGPWHSVLPAWRDAYSMACLHVAKFHYRNGEFKESLRVLDLGLIMGGVLLKKDLE 120

Query: 87  SAIKLISLVKSNTTAENLQE 28
           SAI++++       +E  ++
Sbjct: 121 SAIEIVTAKSREKESEGFEK 140


>ref|XP_002513451.1| transcription factor, putative [Ricinus communis]
           gi|223547359|gb|EEF48854.1| transcription factor,
           putative [Ricinus communis]
          Length = 416

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/67 (77%), Positives = 61/67 (91%)
 Frame = -3

Query: 267 WEQLHSGPWHSVLPVWRDAYSMSCLQVASFYYRNGNFKEALKVLDMGVIMGGVLLRDDLD 88
           WEQLH GPWHSV PVWRDAYSM+CL VA F+Y+NG FK+AL+VLDMGVIMGG+LLR DLD
Sbjct: 58  WEQLHCGPWHSVSPVWRDAYSMACLHVAKFHYQNGEFKDALRVLDMGVIMGGMLLRKDLD 117

Query: 87  SAIKLIS 67
           SAI++I+
Sbjct: 118 SAIEIIT 124


>ref|XP_003539056.1| PREDICTED: lysine-specific demethylase 8-like [Glycine max]
          Length = 575

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = -3

Query: 267 WEQLHSGPWHSVLPVWRDAYSMSCLQVASFYYRNGNFKEALKVLDMGVIMGGVLLRDDLD 88
           WEQLHSGPWHSVLPVWRDAYSM+CL VA  +YRNG F++AL+VLD+G+IMGG LLR DLD
Sbjct: 225 WEQLHSGPWHSVLPVWRDAYSMACLLVARHHYRNGEFRDALRVLDLGIIMGGTLLRKDLD 284

Query: 87  SAIKLIS 67
           SAI+ IS
Sbjct: 285 SAIEKIS 291


>ref|XP_004154619.1| PREDICTED: lysine-specific demethylase 8-like [Cucumis sativus]
          Length = 413

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/67 (74%), Positives = 59/67 (88%)
 Frame = -3

Query: 267 WEQLHSGPWHSVLPVWRDAYSMSCLQVASFYYRNGNFKEALKVLDMGVIMGGVLLRDDLD 88
           WEQLHSGPWHSVLP+WRDAYSM+CL +A F++  G+FKEAL+VLDMGVIMGG L R+DLD
Sbjct: 62  WEQLHSGPWHSVLPIWRDAYSMACLYMARFHFAGGDFKEALRVLDMGVIMGGPLFRNDLD 121

Query: 87  SAIKLIS 67
           SAI  +S
Sbjct: 122 SAIAKVS 128


>ref|XP_003539394.1| PREDICTED: lysine-specific demethylase 8-like [Glycine max]
          Length = 413

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/67 (74%), Positives = 58/67 (86%)
 Frame = -3

Query: 267 WEQLHSGPWHSVLPVWRDAYSMSCLQVASFYYRNGNFKEALKVLDMGVIMGGVLLRDDLD 88
           WEQLHSGPWHSVLPVWRDAYSM+CL VA  +Y NG F +AL+VLD+G+IMGG LLR DLD
Sbjct: 63  WEQLHSGPWHSVLPVWRDAYSMACLHVARHHYGNGEFLDALRVLDLGIIMGGTLLRKDLD 122

Query: 87  SAIKLIS 67
           SAI+ +S
Sbjct: 123 SAIEKVS 129


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